Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.24■□□□□ 0.19
NPAS1Q99742 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
NPAS1Q99742 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS1Q99742 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS1Q99742 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS1Q99742 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.24■□□□□ 0.19
NPAS1Q99742 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.24■□□□□ 0.19
NPAS1Q99742 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.24■□□□□ 0.19
NPAS1Q99742 AC005336.2-201ENST00000593183 939 ntBASIC16.24■□□□□ 0.19
NPAS1Q99742 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.24■□□□□ 0.19
NPAS1Q99742 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.24■□□□□ 0.19
NPAS1Q99742 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS1Q99742 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS1Q99742 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
NPAS1Q99742 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS1Q99742 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS1Q99742 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS1Q99742 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
NPAS1Q99742 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS1Q99742 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.24■□□□□ 0.19
NPAS1Q99742 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS1Q99742 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS1Q99742 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.24■□□□□ 0.19
NPAS1Q99742 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
NPAS1Q99742 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS1Q99742 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPAS1Q99742 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
NPAS1Q99742 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.24■□□□□ 0.19
NPAS1Q99742 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS1Q99742 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
NPAS1Q99742 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS1Q99742 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS1Q99742 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS1Q99742 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS1Q99742 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.23■□□□□ 0.19
NPAS1Q99742 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS1Q99742 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS1Q99742 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.23■□□□□ 0.19
NPAS1Q99742 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS1Q99742 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.23■□□□□ 0.19
NPAS1Q99742 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS1Q99742 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS1Q99742 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.23■□□□□ 0.19
NPAS1Q99742 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS1Q99742 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
NPAS1Q99742 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
NPAS1Q99742 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS1Q99742 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.23■□□□□ 0.19
NPAS1Q99742 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS1Q99742 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS1Q99742 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS1Q99742 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
NPAS1Q99742 TOB2P1-201ENST00000469761 992 ntBASIC16.23■□□□□ 0.19
NPAS1Q99742 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS1Q99742 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.23■□□□□ 0.19
NPAS1Q99742 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS1Q99742 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.23■□□□□ 0.19
NPAS1Q99742 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.23■□□□□ 0.19
NPAS1Q99742 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS1Q99742 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
NPAS1Q99742 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.23■□□□□ 0.19
NPAS1Q99742 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS1Q99742 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.23■□□□□ 0.19
NPAS1Q99742 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS1Q99742 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS1Q99742 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS1Q99742 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.23■□□□□ 0.19
NPAS1Q99742 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.23■□□□□ 0.19
NPAS1Q99742 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS1Q99742 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS1Q99742 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS1Q99742 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.23■□□□□ 0.19
NPAS1Q99742 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPAS1Q99742 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.23■□□□□ 0.19
NPAS1Q99742 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.22■□□□□ 0.19
NPAS1Q99742 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS1Q99742 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS1Q99742 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.22■□□□□ 0.19
NPAS1Q99742 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
NPAS1Q99742 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS1Q99742 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.22■□□□□ 0.19
NPAS1Q99742 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
NPAS1Q99742 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
NPAS1Q99742 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS1Q99742 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
NPAS1Q99742 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.22■□□□□ 0.19
NPAS1Q99742 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS1Q99742 DRAXINP1-201ENST00000437611 948 ntBASIC16.22■□□□□ 0.19
NPAS1Q99742 LINC00265-3P-201ENST00000447588 903 ntBASIC16.22■□□□□ 0.19
NPAS1Q99742 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.22■□□□□ 0.19
NPAS1Q99742 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS1Q99742 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.22■□□□□ 0.19
NPAS1Q99742 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS1Q99742 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.22■□□□□ 0.19
NPAS1Q99742 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.22■□□□□ 0.19
NPAS1Q99742 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.22■□□□□ 0.19
NPAS1Q99742 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.22■□□□□ 0.19
NPAS1Q99742 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS1Q99742 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS1Q99742 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms