Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 NCF1C-201ENST00000438382 1427 ntBASIC15.95■□□□□ 0.14
SPENQ96T58 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.95■□□□□ 0.14
SPENQ96T58 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
SPENQ96T58 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
SPENQ96T58 AL513210.1-201ENST00000629608 234 ntBASIC15.95■□□□□ 0.14
SPENQ96T58 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SPENQ96T58 AC092919.2-201ENST00000623631 1645 ntBASIC15.95■□□□□ 0.14
SPENQ96T58 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SPENQ96T58 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SPENQ96T58 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SPENQ96T58 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SPENQ96T58 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
SPENQ96T58 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SPENQ96T58 AP000997.3-201ENST00000623333 2250 ntBASIC15.95■□□□□ 0.14
SPENQ96T58 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC15.95■□□□□ 0.14
SPENQ96T58 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
SPENQ96T58 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SPENQ96T58 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SPENQ96T58 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SPENQ96T58 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SPENQ96T58 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SPENQ96T58 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC15.95■□□□□ 0.14
SPENQ96T58 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.95■□□□□ 0.14
SPENQ96T58 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SPENQ96T58 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC15.95■□□□□ 0.14
SPENQ96T58 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SPENQ96T58 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SPENQ96T58 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.95■□□□□ 0.14
SPENQ96T58 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.95■□□□□ 0.14
SPENQ96T58 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.95■□□□□ 0.14
SPENQ96T58 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.95■□□□□ 0.14
SPENQ96T58 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SPENQ96T58 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.94■□□□□ 0.14
SPENQ96T58 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SPENQ96T58 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SPENQ96T58 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SPENQ96T58 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.94■□□□□ 0.14
SPENQ96T58 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SPENQ96T58 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.94■□□□□ 0.14
SPENQ96T58 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SPENQ96T58 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SPENQ96T58 MIR661-201ENST00000384842 89 ntBASIC15.94■□□□□ 0.14
SPENQ96T58 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SPENQ96T58 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SPENQ96T58 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SPENQ96T58 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SPENQ96T58 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.94■□□□□ 0.14
SPENQ96T58 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC15.94■□□□□ 0.14
SPENQ96T58 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SPENQ96T58 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SPENQ96T58 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SPENQ96T58 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC15.94■□□□□ 0.14
SPENQ96T58 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SPENQ96T58 PRSS29P-201ENST00000440800 595 ntBASIC15.94■□□□□ 0.14
SPENQ96T58 CEND1P1-201ENST00000451006 455 ntBASIC15.94■□□□□ 0.14
SPENQ96T58 PRYP5-201ENST00000451909 266 ntBASIC15.94■□□□□ 0.14
SPENQ96T58 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.94■□□□□ 0.14
SPENQ96T58 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.94■□□□□ 0.14
SPENQ96T58 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.94■□□□□ 0.14
SPENQ96T58 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.94■□□□□ 0.14
SPENQ96T58 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.94■□□□□ 0.14
SPENQ96T58 PODN-203ENST00000395871 2744 ntTSL 5 BASIC15.94■□□□□ 0.14
SPENQ96T58 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SPENQ96T58 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC15.94■□□□□ 0.14
SPENQ96T58 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC15.94■□□□□ 0.14
SPENQ96T58 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
SPENQ96T58 AC007274.1-201ENST00000439805 662 ntBASIC15.93■□□□□ 0.14
SPENQ96T58 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
SPENQ96T58 AC093520.2-201ENST00000561830 333 ntBASIC15.93■□□□□ 0.14
SPENQ96T58 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.93■□□□□ 0.14
SPENQ96T58 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SPENQ96T58 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SPENQ96T58 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SPENQ96T58 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SPENQ96T58 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SPENQ96T58 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SPENQ96T58 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.93■□□□□ 0.14
SPENQ96T58 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
SPENQ96T58 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.93■□□□□ 0.14
SPENQ96T58 AC092364.2-202ENST00000597012 1073 ntBASIC15.93■□□□□ 0.14
SPENQ96T58 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
SPENQ96T58 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.93■□□□□ 0.14
SPENQ96T58 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
SPENQ96T58 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SPENQ96T58 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC15.93■□□□□ 0.14
SPENQ96T58 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC15.93■□□□□ 0.14
SPENQ96T58 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SPENQ96T58 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.93■□□□□ 0.14
SPENQ96T58 AC093503.3-201ENST00000624917 2352 ntBASIC15.93■□□□□ 0.14
SPENQ96T58 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SPENQ96T58 RHOQP3-201ENST00000437982 621 ntBASIC15.93■□□□□ 0.14
SPENQ96T58 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.93■□□□□ 0.14
SPENQ96T58 AC073592.5-201ENST00000624854 528 ntBASIC15.93■□□□□ 0.14
SPENQ96T58 LINC00628-201ENST00000628516 1289 ntBASIC15.93■□□□□ 0.14
SPENQ96T58 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SPENQ96T58 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SPENQ96T58 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SPENQ96T58 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SPENQ96T58 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SPENQ96T58 TSEN15P1-201ENST00000423257 515 ntBASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms