Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDK5RAP2Q96SN8 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.84■□□□□ 0.93
CDK5RAP2Q96SN8 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CDK5RAP2Q96SN8 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.84■□□□□ 0.93
CDK5RAP2Q96SN8 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDK5RAP2Q96SN8 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDK5RAP2Q96SN8 ABALON-201ENST00000629058 1903 ntBASIC20.84■□□□□ 0.93
CDK5RAP2Q96SN8 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CDK5RAP2Q96SN8 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC20.84■□□□□ 0.93
CDK5RAP2Q96SN8 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CDK5RAP2Q96SN8 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20.84■□□□□ 0.93
CDK5RAP2Q96SN8 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDK5RAP2Q96SN8 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDK5RAP2Q96SN8 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDK5RAP2Q96SN8 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDK5RAP2Q96SN8 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.84■□□□□ 0.93
CDK5RAP2Q96SN8 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.84■□□□□ 0.93
CDK5RAP2Q96SN8 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20.84■□□□□ 0.93
CDK5RAP2Q96SN8 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDK5RAP2Q96SN8 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC20.84■□□□□ 0.93
CDK5RAP2Q96SN8 STK25P1-201ENST00000585406 838 ntBASIC20.84■□□□□ 0.93
CDK5RAP2Q96SN8 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.84■□□□□ 0.93
CDK5RAP2Q96SN8 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDK5RAP2Q96SN8 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CDK5RAP2Q96SN8 AL590787.1-201ENST00000568856 1315 ntBASIC20.83■□□□□ 0.93
CDK5RAP2Q96SN8 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.83■□□□□ 0.93
CDK5RAP2Q96SN8 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC20.83■□□□□ 0.93
CDK5RAP2Q96SN8 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CDK5RAP2Q96SN8 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.83■□□□□ 0.93
CDK5RAP2Q96SN8 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.83■□□□□ 0.93
CDK5RAP2Q96SN8 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
CDK5RAP2Q96SN8 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC20.83■□□□□ 0.93
CDK5RAP2Q96SN8 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
CDK5RAP2Q96SN8 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.83■□□□□ 0.92
CDK5RAP2Q96SN8 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CDK5RAP2Q96SN8 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CDK5RAP2Q96SN8 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC20.83■□□□□ 0.92
CDK5RAP2Q96SN8 AC027601.4-201ENST00000611259 610 ntBASIC20.83■□□□□ 0.92
CDK5RAP2Q96SN8 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CDK5RAP2Q96SN8 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CDK5RAP2Q96SN8 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.83■□□□□ 0.92
CDK5RAP2Q96SN8 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CDK5RAP2Q96SN8 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CDK5RAP2Q96SN8 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.83■□□□□ 0.92
CDK5RAP2Q96SN8 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CDK5RAP2Q96SN8 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CDK5RAP2Q96SN8 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CDK5RAP2Q96SN8 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDK5RAP2Q96SN8 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDK5RAP2Q96SN8 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.82■□□□□ 0.92
CDK5RAP2Q96SN8 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CDK5RAP2Q96SN8 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDK5RAP2Q96SN8 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDK5RAP2Q96SN8 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDK5RAP2Q96SN8 AC004832.2-201ENST00000426397 482 ntBASIC20.82■□□□□ 0.92
CDK5RAP2Q96SN8 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDK5RAP2Q96SN8 AC018845.2-201ENST00000568326 409 ntBASIC20.82■□□□□ 0.92
CDK5RAP2Q96SN8 AC010654.1-201ENST00000615722 808 ntBASIC20.82■□□□□ 0.92
CDK5RAP2Q96SN8 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDK5RAP2Q96SN8 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDK5RAP2Q96SN8 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CDK5RAP2Q96SN8 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CDK5RAP2Q96SN8 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CDK5RAP2Q96SN8 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CDK5RAP2Q96SN8 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CDK5RAP2Q96SN8 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDK5RAP2Q96SN8 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDK5RAP2Q96SN8 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.82■□□□□ 0.92
CDK5RAP2Q96SN8 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDK5RAP2Q96SN8 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.81■□□□□ 0.92
CDK5RAP2Q96SN8 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDK5RAP2Q96SN8 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20.81■□□□□ 0.92
CDK5RAP2Q96SN8 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CDK5RAP2Q96SN8 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDK5RAP2Q96SN8 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDK5RAP2Q96SN8 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDK5RAP2Q96SN8 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDK5RAP2Q96SN8 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDK5RAP2Q96SN8 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
CDK5RAP2Q96SN8 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC20.81■□□□□ 0.92
CDK5RAP2Q96SN8 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDK5RAP2Q96SN8 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDK5RAP2Q96SN8 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.81■□□□□ 0.92
CDK5RAP2Q96SN8 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.81■□□□□ 0.92
CDK5RAP2Q96SN8 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDK5RAP2Q96SN8 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDK5RAP2Q96SN8 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDK5RAP2Q96SN8 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC20.81■□□□□ 0.92
CDK5RAP2Q96SN8 RPS2P28-201ENST00000314255 741 ntBASIC20.81■□□□□ 0.92
CDK5RAP2Q96SN8 ZNF259P1-201ENST00000407656 1365 ntBASIC20.81■□□□□ 0.92
CDK5RAP2Q96SN8 GPR89P-201ENST00000407924 1495 ntBASIC20.81■□□□□ 0.92
CDK5RAP2Q96SN8 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDK5RAP2Q96SN8 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.81■□□□□ 0.92
CDK5RAP2Q96SN8 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC20.81■□□□□ 0.92
CDK5RAP2Q96SN8 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CDK5RAP2Q96SN8 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDK5RAP2Q96SN8 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC20.81■□□□□ 0.92
CDK5RAP2Q96SN8 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC20.81■□□□□ 0.92
CDK5RAP2Q96SN8 AL139424.1-201ENST00000607572 797 ntBASIC20.81■□□□□ 0.92
CDK5RAP2Q96SN8 AC002310.6-201ENST00000624451 1377 ntBASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms