Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CFAP54Q96N23 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CFAP54Q96N23 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CFAP54Q96N23 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CFAP54Q96N23 AC009154.2-201ENST00000621177 724 ntBASIC17.34■□□□□ 0.37
CFAP54Q96N23 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.34■□□□□ 0.37
CFAP54Q96N23 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.34■□□□□ 0.37
CFAP54Q96N23 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CFAP54Q96N23 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CFAP54Q96N23 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.34■□□□□ 0.37
CFAP54Q96N23 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CFAP54Q96N23 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CFAP54Q96N23 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CFAP54Q96N23 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.34■□□□□ 0.37
CFAP54Q96N23 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC17.34■□□□□ 0.37
CFAP54Q96N23 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.34■□□□□ 0.37
CFAP54Q96N23 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.34■□□□□ 0.37
CFAP54Q96N23 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CFAP54Q96N23 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.34■□□□□ 0.37
CFAP54Q96N23 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.33■□□□□ 0.37
CFAP54Q96N23 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CFAP54Q96N23 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CFAP54Q96N23 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CFAP54Q96N23 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CFAP54Q96N23 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.33■□□□□ 0.37
CFAP54Q96N23 PGF-202ENST00000405431 666 ntTSL 5 BASIC17.33■□□□□ 0.37
CFAP54Q96N23 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.33■□□□□ 0.37
CFAP54Q96N23 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.33■□□□□ 0.37
CFAP54Q96N23 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.33■□□□□ 0.37
CFAP54Q96N23 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.37
CFAP54Q96N23 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
CFAP54Q96N23 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CFAP54Q96N23 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.33■□□□□ 0.36
CFAP54Q96N23 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CFAP54Q96N23 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
CFAP54Q96N23 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.33■□□□□ 0.36
CFAP54Q96N23 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CFAP54Q96N23 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.33■□□□□ 0.36
CFAP54Q96N23 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.33■□□□□ 0.36
CFAP54Q96N23 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CFAP54Q96N23 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.33■□□□□ 0.36
CFAP54Q96N23 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.33■□□□□ 0.36
CFAP54Q96N23 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.33■□□□□ 0.36
CFAP54Q96N23 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC17.33■□□□□ 0.36
CFAP54Q96N23 AC068587.10-201ENST00000641210 219 ntBASIC17.33■□□□□ 0.36
CFAP54Q96N23 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CFAP54Q96N23 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.32■□□□□ 0.36
CFAP54Q96N23 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.32■□□□□ 0.36
CFAP54Q96N23 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CFAP54Q96N23 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.32■□□□□ 0.36
CFAP54Q96N23 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.32■□□□□ 0.36
CFAP54Q96N23 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CFAP54Q96N23 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.32■□□□□ 0.36
CFAP54Q96N23 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.32■□□□□ 0.36
CFAP54Q96N23 AC004706.3-202ENST00000621574 984 ntBASIC17.32■□□□□ 0.36
CFAP54Q96N23 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.32■□□□□ 0.36
CFAP54Q96N23 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CFAP54Q96N23 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CFAP54Q96N23 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.32■□□□□ 0.36
CFAP54Q96N23 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CFAP54Q96N23 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CFAP54Q96N23 AC092919.2-201ENST00000623631 1645 ntBASIC17.32■□□□□ 0.36
CFAP54Q96N23 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CFAP54Q96N23 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC17.32■□□□□ 0.36
CFAP54Q96N23 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CFAP54Q96N23 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CFAP54Q96N23 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CFAP54Q96N23 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CFAP54Q96N23 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.32■□□□□ 0.36
CFAP54Q96N23 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CFAP54Q96N23 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
CFAP54Q96N23 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CFAP54Q96N23 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CFAP54Q96N23 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CFAP54Q96N23 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CFAP54Q96N23 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CFAP54Q96N23 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.32■□□□□ 0.36
CFAP54Q96N23 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.31■□□□□ 0.36
CFAP54Q96N23 LINC00602-201ENST00000629776 2065 ntBASIC17.31■□□□□ 0.36
CFAP54Q96N23 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CFAP54Q96N23 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CFAP54Q96N23 AL163051.1-201ENST00000569214 1512 ntBASIC17.31■□□□□ 0.36
CFAP54Q96N23 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.31■□□□□ 0.36
CFAP54Q96N23 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CFAP54Q96N23 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.31■□□□□ 0.36
CFAP54Q96N23 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.31■□□□□ 0.36
CFAP54Q96N23 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.31■□□□□ 0.36
CFAP54Q96N23 AC096734.2-201ENST00000562054 433 ntBASIC17.31■□□□□ 0.36
CFAP54Q96N23 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
CFAP54Q96N23 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC17.31■□□□□ 0.36
CFAP54Q96N23 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CFAP54Q96N23 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CFAP54Q96N23 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CFAP54Q96N23 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CFAP54Q96N23 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CFAP54Q96N23 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.31■□□□□ 0.36
CFAP54Q96N23 KRT17P7-201ENST00000451704 1104 ntBASIC17.31■□□□□ 0.36
CFAP54Q96N23 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CFAP54Q96N23 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.31■□□□□ 0.36
CFAP54Q96N23 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms