Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00479Q96M42 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC00479Q96M42 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC13.64□□□□□ -0.23
LINC00479Q96M42 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00479Q96M42 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00479Q96M42 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00479Q96M42 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
LINC00479Q96M42 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00479Q96M42 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00479Q96M42 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00479Q96M42 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
LINC00479Q96M42 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00479Q96M42 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
LINC00479Q96M42 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC13.63□□□□□ -0.23
LINC00479Q96M42 AC132938.6-201ENST00000623828 1655 ntBASIC13.63□□□□□ -0.23
LINC00479Q96M42 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00479Q96M42 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00479Q96M42 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00479Q96M42 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00479Q96M42 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
LINC00479Q96M42 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00479Q96M42 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC13.63□□□□□ -0.23
LINC00479Q96M42 FLJ38576-201ENST00000623820 2459 ntBASIC13.63□□□□□ -0.23
LINC00479Q96M42 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00479Q96M42 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC13.63□□□□□ -0.23
LINC00479Q96M42 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
LINC00479Q96M42 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00479Q96M42 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00479Q96M42 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00479Q96M42 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00479Q96M42 AC133681.1-201ENST00000465482 601 ntBASIC13.63□□□□□ -0.23
LINC00479Q96M42 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
LINC00479Q96M42 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00479Q96M42 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
LINC00479Q96M42 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC13.63□□□□□ -0.23
LINC00479Q96M42 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00479Q96M42 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC13.63□□□□□ -0.23
LINC00479Q96M42 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
LINC00479Q96M42 AC104771.1-201ENST00000603335 964 ntBASIC13.63□□□□□ -0.23
LINC00479Q96M42 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00479Q96M42 CABP2-204ENST00000636477 941 ntTSL 5 BASIC13.63□□□□□ -0.23
LINC00479Q96M42 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC13.63□□□□□ -0.23
LINC00479Q96M42 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC13.63□□□□□ -0.23
LINC00479Q96M42 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00479Q96M42 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00479Q96M42 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00479Q96M42 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
LINC00479Q96M42 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC13.63□□□□□ -0.23
LINC00479Q96M42 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00479Q96M42 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
LINC00479Q96M42 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00479Q96M42 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC13.63□□□□□ -0.23
LINC00479Q96M42 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00479Q96M42 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC13.63□□□□□ -0.23
LINC00479Q96M42 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00479Q96M42 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
LINC00479Q96M42 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00479Q96M42 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00479Q96M42 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00479Q96M42 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00479Q96M42 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00479Q96M42 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00479Q96M42 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC00479Q96M42 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
LINC00479Q96M42 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
LINC00479Q96M42 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00479Q96M42 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00479Q96M42 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
LINC00479Q96M42 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00479Q96M42 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00479Q96M42 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00479Q96M42 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00479Q96M42 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
LINC00479Q96M42 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00479Q96M42 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC13.62□□□□□ -0.23
LINC00479Q96M42 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00479Q96M42 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC13.62□□□□□ -0.23
LINC00479Q96M42 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00479Q96M42 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00479Q96M42 ISG20-202ENST00000379224 540 ntTSL 3 BASIC13.62□□□□□ -0.23
LINC00479Q96M42 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00479Q96M42 KIRREL3-AS3-201ENST00000404882 831 ntBASIC13.62□□□□□ -0.23
LINC00479Q96M42 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC00479Q96M42 RNA5SP413-201ENST00000516373 109 ntBASIC13.62□□□□□ -0.23
LINC00479Q96M42 DUTP2-201ENST00000519164 463 ntBASIC13.62□□□□□ -0.23
LINC00479Q96M42 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC00479Q96M42 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC00479Q96M42 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC00479Q96M42 AP000692.2-201ENST00000608391 879 ntBASIC13.62□□□□□ -0.23
LINC00479Q96M42 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00479Q96M42 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
LINC00479Q96M42 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00479Q96M42 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00479Q96M42 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC00479Q96M42 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC00479Q96M42 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
LINC00479Q96M42 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00479Q96M42 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC13.62□□□□□ -0.23
LINC00479Q96M42 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00479Q96M42 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms