Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
TIMD4Q96H15 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
TIMD4Q96H15 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TIMD4Q96H15 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.95□□□□□ -0.02
TIMD4Q96H15 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TIMD4Q96H15 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TIMD4Q96H15 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TIMD4Q96H15 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
TIMD4Q96H15 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TIMD4Q96H15 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TIMD4Q96H15 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TIMD4Q96H15 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.95□□□□□ -0.02
TIMD4Q96H15 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.95□□□□□ -0.02
TIMD4Q96H15 AC132008.2-207ENST00000454517 770 ntBASIC14.95□□□□□ -0.02
TIMD4Q96H15 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TIMD4Q96H15 SCARNA2-201ENST00000458748 420 ntBASIC14.95□□□□□ -0.02
TIMD4Q96H15 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14.95□□□□□ -0.02
TIMD4Q96H15 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC14.95□□□□□ -0.02
TIMD4Q96H15 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.95□□□□□ -0.02
TIMD4Q96H15 AL031008.1-201ENST00000619963 541 ntBASIC14.95□□□□□ -0.02
TIMD4Q96H15 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TIMD4Q96H15 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TIMD4Q96H15 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TIMD4Q96H15 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TIMD4Q96H15 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
TIMD4Q96H15 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.95□□□□□ -0.02
TIMD4Q96H15 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TIMD4Q96H15 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC14.95□□□□□ -0.02
TIMD4Q96H15 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TIMD4Q96H15 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TIMD4Q96H15 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TIMD4Q96H15 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.94□□□□□ -0.02
TIMD4Q96H15 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TIMD4Q96H15 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TIMD4Q96H15 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC14.94□□□□□ -0.02
TIMD4Q96H15 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TIMD4Q96H15 AC087289.5-201ENST00000586076 3175 ntBASIC14.94□□□□□ -0.02
TIMD4Q96H15 INTS4P1-201ENST00000438455 1935 ntBASIC14.94□□□□□ -0.02
TIMD4Q96H15 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
TIMD4Q96H15 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TIMD4Q96H15 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TIMD4Q96H15 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TIMD4Q96H15 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.94□□□□□ -0.02
TIMD4Q96H15 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TIMD4Q96H15 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TIMD4Q96H15 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.94□□□□□ -0.02
TIMD4Q96H15 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.94□□□□□ -0.02
TIMD4Q96H15 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TIMD4Q96H15 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TIMD4Q96H15 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.94□□□□□ -0.02
TIMD4Q96H15 AC008608.2-201ENST00000606089 416 ntBASIC14.94□□□□□ -0.02
TIMD4Q96H15 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC14.94□□□□□ -0.02
TIMD4Q96H15 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC14.94□□□□□ -0.02
TIMD4Q96H15 AC090164.3-201ENST00000610780 2143 ntBASIC14.94□□□□□ -0.02
TIMD4Q96H15 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.94□□□□□ -0.02
TIMD4Q96H15 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TIMD4Q96H15 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
TIMD4Q96H15 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TIMD4Q96H15 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TIMD4Q96H15 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TIMD4Q96H15 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
TIMD4Q96H15 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC14.94□□□□□ -0.02
TIMD4Q96H15 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TIMD4Q96H15 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TIMD4Q96H15 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
TIMD4Q96H15 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC14.94□□□□□ -0.02
TIMD4Q96H15 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC14.94□□□□□ -0.02
TIMD4Q96H15 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC14.94□□□□□ -0.02
TIMD4Q96H15 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC14.93□□□□□ -0.02
TIMD4Q96H15 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC14.93□□□□□ -0.02
TIMD4Q96H15 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC14.93□□□□□ -0.02
TIMD4Q96H15 AC093677.2-201ENST00000600169 1863 ntBASIC14.93□□□□□ -0.02
TIMD4Q96H15 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TIMD4Q96H15 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TIMD4Q96H15 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
TIMD4Q96H15 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC14.93□□□□□ -0.02
TIMD4Q96H15 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TIMD4Q96H15 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TIMD4Q96H15 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
TIMD4Q96H15 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TIMD4Q96H15 FUOM-202ENST00000368551 628 ntTSL 3 BASIC14.93□□□□□ -0.02
TIMD4Q96H15 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.93□□□□□ -0.02
TIMD4Q96H15 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.93□□□□□ -0.02
TIMD4Q96H15 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TIMD4Q96H15 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
TIMD4Q96H15 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TIMD4Q96H15 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
TIMD4Q96H15 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.93□□□□□ -0.02
TIMD4Q96H15 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TIMD4Q96H15 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.93□□□□□ -0.02
TIMD4Q96H15 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC14.93□□□□□ -0.02
TIMD4Q96H15 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.93□□□□□ -0.02
TIMD4Q96H15 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.93□□□□□ -0.02
TIMD4Q96H15 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TIMD4Q96H15 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC14.93□□□□□ -0.02
TIMD4Q96H15 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TIMD4Q96H15 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TIMD4Q96H15 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TIMD4Q96H15 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TIMD4Q96H15 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms