Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHMP6Q96FZ7 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHMP6Q96FZ7 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHMP6Q96FZ7 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHMP6Q96FZ7 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CHMP6Q96FZ7 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.97■□□□□ 0.47
CHMP6Q96FZ7 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHMP6Q96FZ7 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHMP6Q96FZ7 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHMP6Q96FZ7 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CHMP6Q96FZ7 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHMP6Q96FZ7 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP6Q96FZ7 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP6Q96FZ7 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP6Q96FZ7 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
CHMP6Q96FZ7 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CHMP6Q96FZ7 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.96■□□□□ 0.47
CHMP6Q96FZ7 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP6Q96FZ7 AL603756.1-201ENST00000606511 2163 ntBASIC17.96■□□□□ 0.47
CHMP6Q96FZ7 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP6Q96FZ7 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.96■□□□□ 0.47
CHMP6Q96FZ7 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
CHMP6Q96FZ7 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP6Q96FZ7 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP6Q96FZ7 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP6Q96FZ7 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.96■□□□□ 0.47
CHMP6Q96FZ7 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP6Q96FZ7 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP6Q96FZ7 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CHMP6Q96FZ7 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP6Q96FZ7 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.96■□□□□ 0.47
CHMP6Q96FZ7 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.96■□□□□ 0.47
CHMP6Q96FZ7 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
CHMP6Q96FZ7 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.96■□□□□ 0.47
CHMP6Q96FZ7 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.96■□□□□ 0.47
CHMP6Q96FZ7 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP6Q96FZ7 AC073648.6-201ENST00000641589 218 ntBASIC17.96■□□□□ 0.47
CHMP6Q96FZ7 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP6Q96FZ7 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.96■□□□□ 0.47
CHMP6Q96FZ7 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP6Q96FZ7 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP6Q96FZ7 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP6Q96FZ7 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.96■□□□□ 0.47
CHMP6Q96FZ7 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
CHMP6Q96FZ7 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.96■□□□□ 0.47
CHMP6Q96FZ7 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP6Q96FZ7 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP6Q96FZ7 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHMP6Q96FZ7 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
CHMP6Q96FZ7 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CHMP6Q96FZ7 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
CHMP6Q96FZ7 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP6Q96FZ7 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP6Q96FZ7 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP6Q96FZ7 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP6Q96FZ7 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CHMP6Q96FZ7 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CHMP6Q96FZ7 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP6Q96FZ7 HLA-J-201ENST00000462773 1622 ntBASIC17.95■□□□□ 0.46
CHMP6Q96FZ7 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.95■□□□□ 0.46
CHMP6Q96FZ7 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.95■□□□□ 0.46
CHMP6Q96FZ7 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CHMP6Q96FZ7 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.95■□□□□ 0.46
CHMP6Q96FZ7 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.95■□□□□ 0.46
CHMP6Q96FZ7 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP6Q96FZ7 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.95■□□□□ 0.46
CHMP6Q96FZ7 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.95■□□□□ 0.46
CHMP6Q96FZ7 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.95■□□□□ 0.46
CHMP6Q96FZ7 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.95■□□□□ 0.46
CHMP6Q96FZ7 MIR4651-201ENST00000582622 73 ntBASIC17.95■□□□□ 0.46
CHMP6Q96FZ7 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.95■□□□□ 0.46
CHMP6Q96FZ7 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP6Q96FZ7 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.95■□□□□ 0.46
CHMP6Q96FZ7 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP6Q96FZ7 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP6Q96FZ7 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP6Q96FZ7 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.95■□□□□ 0.46
CHMP6Q96FZ7 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CHMP6Q96FZ7 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CHMP6Q96FZ7 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CHMP6Q96FZ7 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP6Q96FZ7 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP6Q96FZ7 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
CHMP6Q96FZ7 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
CHMP6Q96FZ7 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP6Q96FZ7 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
CHMP6Q96FZ7 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP6Q96FZ7 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP6Q96FZ7 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP6Q96FZ7 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.95■□□□□ 0.46
CHMP6Q96FZ7 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP6Q96FZ7 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP6Q96FZ7 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP6Q96FZ7 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.94■□□□□ 0.46
CHMP6Q96FZ7 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CHMP6Q96FZ7 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP6Q96FZ7 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP6Q96FZ7 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CHMP6Q96FZ7 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP6Q96FZ7 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms