Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
DDX11Q96FC9 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
DDX11Q96FC9 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
DDX11Q96FC9 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC21.17■□□□□ 0.98
DDX11Q96FC9 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX11Q96FC9 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX11Q96FC9 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
DDX11Q96FC9 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
DDX11Q96FC9 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
DDX11Q96FC9 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
DDX11Q96FC9 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC21.17■□□□□ 0.98
DDX11Q96FC9 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX11Q96FC9 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
DDX11Q96FC9 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX11Q96FC9 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDX11Q96FC9 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDX11Q96FC9 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDX11Q96FC9 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC21.16■□□□□ 0.98
DDX11Q96FC9 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDX11Q96FC9 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC21.16■□□□□ 0.98
DDX11Q96FC9 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
DDX11Q96FC9 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
DDX11Q96FC9 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDX11Q96FC9 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC21.16■□□□□ 0.98
DDX11Q96FC9 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDX11Q96FC9 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDX11Q96FC9 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDX11Q96FC9 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDX11Q96FC9 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC21.16■□□□□ 0.98
DDX11Q96FC9 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC21.16■□□□□ 0.98
DDX11Q96FC9 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC21.16■□□□□ 0.98
DDX11Q96FC9 AC012615.1-201ENST00000565797 1299 ntBASIC21.16■□□□□ 0.98
DDX11Q96FC9 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC21.16■□□□□ 0.98
DDX11Q96FC9 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
DDX11Q96FC9 AL390719.2-201ENST00000606993 987 ntBASIC21.16■□□□□ 0.98
DDX11Q96FC9 IFNL4P1-201ENST00000607083 540 ntBASIC21.16■□□□□ 0.98
DDX11Q96FC9 AL121772.3-201ENST00000610840 674 ntBASIC21.16■□□□□ 0.98
DDX11Q96FC9 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDX11Q96FC9 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDX11Q96FC9 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
DDX11Q96FC9 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDX11Q96FC9 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
DDX11Q96FC9 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDX11Q96FC9 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDX11Q96FC9 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
DDX11Q96FC9 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DDX11Q96FC9 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC21.15■□□□□ 0.98
DDX11Q96FC9 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
DDX11Q96FC9 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
DDX11Q96FC9 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
DDX11Q96FC9 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DDX11Q96FC9 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
DDX11Q96FC9 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DDX11Q96FC9 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DDX11Q96FC9 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DDX11Q96FC9 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC21.15■□□□□ 0.98
DDX11Q96FC9 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DDX11Q96FC9 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC21.15■□□□□ 0.98
DDX11Q96FC9 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC21.15■□□□□ 0.98
DDX11Q96FC9 AC091304.2-201ENST00000564639 760 ntBASIC21.15■□□□□ 0.98
DDX11Q96FC9 LINC01711-201ENST00000598340 967 ntBASIC21.15■□□□□ 0.98
DDX11Q96FC9 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC21.15■□□□□ 0.98
DDX11Q96FC9 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
DDX11Q96FC9 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC21.15■□□□□ 0.98
DDX11Q96FC9 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
DDX11Q96FC9 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
DDX11Q96FC9 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
DDX11Q96FC9 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC21.15■□□□□ 0.98
DDX11Q96FC9 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC21.15■□□□□ 0.98
DDX11Q96FC9 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DDX11Q96FC9 FST-202ENST00000396947 2538 ntTSL 5 BASIC21.15■□□□□ 0.98
DDX11Q96FC9 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DDX11Q96FC9 AC132938.6-201ENST00000623828 1655 ntBASIC21.15■□□□□ 0.98
DDX11Q96FC9 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DDX11Q96FC9 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DDX11Q96FC9 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC21.15■□□□□ 0.98
DDX11Q96FC9 EML3-212ENST00000494176 2901 ntTSL 2 BASIC21.15■□□□□ 0.98
DDX11Q96FC9 EML3-216ENST00000529309 2909 ntTSL 2 BASIC21.15■□□□□ 0.98
DDX11Q96FC9 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
DDX11Q96FC9 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
DDX11Q96FC9 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC21.14■□□□□ 0.98
DDX11Q96FC9 LTB4R2-202ENST00000528054 3092 ntBASIC21.14■□□□□ 0.98
DDX11Q96FC9 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
DDX11Q96FC9 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
DDX11Q96FC9 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
DDX11Q96FC9 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC21.14■□□□□ 0.97
DDX11Q96FC9 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC21.14■□□□□ 0.97
DDX11Q96FC9 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
DDX11Q96FC9 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC21.14■□□□□ 0.97
DDX11Q96FC9 TSPY19P-201ENST00000418461 509 ntBASIC21.14■□□□□ 0.97
DDX11Q96FC9 TSPY18P-201ENST00000441642 509 ntBASIC21.14■□□□□ 0.97
DDX11Q96FC9 AC104819.1-201ENST00000504587 486 ntBASIC21.14■□□□□ 0.97
DDX11Q96FC9 GPR32P1-201ENST00000601788 811 ntBASIC21.14■□□□□ 0.97
DDX11Q96FC9 AC024563.2-201ENST00000603282 481 ntBASIC21.14■□□□□ 0.97
DDX11Q96FC9 AL732292.2-201ENST00000609649 430 ntBASIC21.14■□□□□ 0.97
DDX11Q96FC9 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC21.14■□□□□ 0.97
DDX11Q96FC9 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
DDX11Q96FC9 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
DDX11Q96FC9 HLA-DQB1-201ENST00000374943 1656 ntBASIC21.14■□□□□ 0.97
DDX11Q96FC9 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms