Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC19.22■□□□□ 0.67
TRIM43Q96BQ3 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.22■□□□□ 0.67
TRIM43Q96BQ3 GSAP-205ENST00000430584 600 ntTSL 5 BASIC19.22■□□□□ 0.67
TRIM43Q96BQ3 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC19.22■□□□□ 0.67
TRIM43Q96BQ3 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.22■□□□□ 0.67
TRIM43Q96BQ3 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM43Q96BQ3 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.22■□□□□ 0.67
TRIM43Q96BQ3 RNA5SP421-201ENST00000516864 134 ntBASIC19.22■□□□□ 0.67
TRIM43Q96BQ3 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
TRIM43Q96BQ3 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
TRIM43Q96BQ3 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.22■□□□□ 0.67
TRIM43Q96BQ3 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.22■□□□□ 0.67
TRIM43Q96BQ3 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM43Q96BQ3 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.22■□□□□ 0.67
TRIM43Q96BQ3 AL353135.1-201ENST00000606729 504 ntBASIC19.22■□□□□ 0.67
TRIM43Q96BQ3 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM43Q96BQ3 AC019129.2-201ENST00000609837 1235 ntBASIC19.22■□□□□ 0.67
TRIM43Q96BQ3 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.22■□□□□ 0.67
TRIM43Q96BQ3 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
TRIM43Q96BQ3 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
TRIM43Q96BQ3 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM43Q96BQ3 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM43Q96BQ3 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM43Q96BQ3 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM43Q96BQ3 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
TRIM43Q96BQ3 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM43Q96BQ3 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM43Q96BQ3 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM43Q96BQ3 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
TRIM43Q96BQ3 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM43Q96BQ3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
TRIM43Q96BQ3 AC097637.2-201ENST00000624096 1997 ntBASIC19.21■□□□□ 0.67
TRIM43Q96BQ3 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.21■□□□□ 0.67
TRIM43Q96BQ3 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM43Q96BQ3 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM43Q96BQ3 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM43Q96BQ3 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM43Q96BQ3 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
TRIM43Q96BQ3 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.21■□□□□ 0.67
TRIM43Q96BQ3 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TRIM43Q96BQ3 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC19.21■□□□□ 0.67
TRIM43Q96BQ3 AC093214.1-201ENST00000511688 1107 ntBASIC19.21■□□□□ 0.67
TRIM43Q96BQ3 AC015911.4-201ENST00000588022 1070 ntBASIC19.21■□□□□ 0.67
TRIM43Q96BQ3 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC19.21■□□□□ 0.67
TRIM43Q96BQ3 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM43Q96BQ3 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.21■□□□□ 0.67
TRIM43Q96BQ3 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM43Q96BQ3 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.21■□□□□ 0.67
TRIM43Q96BQ3 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM43Q96BQ3 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM43Q96BQ3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.21■□□□□ 0.67
TRIM43Q96BQ3 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM43Q96BQ3 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.2■□□□□ 0.66
TRIM43Q96BQ3 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM43Q96BQ3 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.2■□□□□ 0.66
TRIM43Q96BQ3 AC006116.8-202ENST00000587620 1550 ntBASIC19.2■□□□□ 0.66
TRIM43Q96BQ3 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM43Q96BQ3 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM43Q96BQ3 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM43Q96BQ3 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.2■□□□□ 0.66
TRIM43Q96BQ3 PMS2P4-201ENST00000412466 1052 ntBASIC19.2■□□□□ 0.66
TRIM43Q96BQ3 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM43Q96BQ3 CXCL1P1-201ENST00000502804 216 ntBASIC19.2■□□□□ 0.66
TRIM43Q96BQ3 CCDC74BP1-201ENST00000508880 1123 ntBASIC19.2■□□□□ 0.66
TRIM43Q96BQ3 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.2■□□□□ 0.66
TRIM43Q96BQ3 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TRIM43Q96BQ3 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC19.2■□□□□ 0.66
TRIM43Q96BQ3 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.2■□□□□ 0.66
TRIM43Q96BQ3 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.2■□□□□ 0.66
TRIM43Q96BQ3 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM43Q96BQ3 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM43Q96BQ3 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM43Q96BQ3 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
TRIM43Q96BQ3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM43Q96BQ3 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM43Q96BQ3 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM43Q96BQ3 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM43Q96BQ3 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM43Q96BQ3 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM43Q96BQ3 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
TRIM43Q96BQ3 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM43Q96BQ3 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM43Q96BQ3 METTL26-204ENST00000397665 558 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM43Q96BQ3 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM43Q96BQ3 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC19.19■□□□□ 0.66
TRIM43Q96BQ3 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM43Q96BQ3 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM43Q96BQ3 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM43Q96BQ3 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.19■□□□□ 0.66
TRIM43Q96BQ3 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC19.19■□□□□ 0.66
TRIM43Q96BQ3 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.19■□□□□ 0.66
TRIM43Q96BQ3 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM43Q96BQ3 AC018445.3-201ENST00000624177 1945 ntBASIC19.19■□□□□ 0.66
TRIM43Q96BQ3 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM43Q96BQ3 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.19■□□□□ 0.66
TRIM43Q96BQ3 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM43Q96BQ3 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM43Q96BQ3 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
TRIM43Q96BQ3 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.18■□□□□ 0.66
TRIM43Q96BQ3 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms