Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF25Q96BH1 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF25Q96BH1 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.77■□□□□ 0.6
RNF25Q96BH1 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF25Q96BH1 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF25Q96BH1 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.77■□□□□ 0.59
RNF25Q96BH1 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RNF25Q96BH1 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.59
RNF25Q96BH1 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
RNF25Q96BH1 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF25Q96BH1 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF25Q96BH1 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RNF25Q96BH1 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.76■□□□□ 0.59
RNF25Q96BH1 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
RNF25Q96BH1 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF25Q96BH1 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF25Q96BH1 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF25Q96BH1 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.76■□□□□ 0.59
RNF25Q96BH1 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF25Q96BH1 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
RNF25Q96BH1 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF25Q96BH1 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF25Q96BH1 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF25Q96BH1 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
RNF25Q96BH1 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.76■□□□□ 0.59
RNF25Q96BH1 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RNF25Q96BH1 AC133561.5-201ENST00000635547 218 ntBASIC18.76■□□□□ 0.59
RNF25Q96BH1 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
RNF25Q96BH1 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.76■□□□□ 0.59
RNF25Q96BH1 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF25Q96BH1 AC084018.2-201ENST00000613093 2607 ntBASIC18.76■□□□□ 0.59
RNF25Q96BH1 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF25Q96BH1 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.76■□□□□ 0.59
RNF25Q96BH1 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF25Q96BH1 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.76■□□□□ 0.59
RNF25Q96BH1 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF25Q96BH1 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF25Q96BH1 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
RNF25Q96BH1 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF25Q96BH1 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF25Q96BH1 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF25Q96BH1 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF25Q96BH1 AC124067.4-201ENST00000519691 2379 ntBASIC18.75■□□□□ 0.59
RNF25Q96BH1 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF25Q96BH1 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
RNF25Q96BH1 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF25Q96BH1 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF25Q96BH1 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF25Q96BH1 LIN28AP1-201ENST00000429574 405 ntBASIC18.75■□□□□ 0.59
RNF25Q96BH1 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF25Q96BH1 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF25Q96BH1 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.75■□□□□ 0.59
RNF25Q96BH1 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF25Q96BH1 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RNF25Q96BH1 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RNF25Q96BH1 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.75■□□□□ 0.59
RNF25Q96BH1 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.75■□□□□ 0.59
RNF25Q96BH1 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF25Q96BH1 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.75■□□□□ 0.59
RNF25Q96BH1 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF25Q96BH1 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF25Q96BH1 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF25Q96BH1 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RNF25Q96BH1 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF25Q96BH1 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF25Q96BH1 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF25Q96BH1 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF25Q96BH1 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF25Q96BH1 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF25Q96BH1 AL355312.1-201ENST00000407115 2176 ntBASIC18.74■□□□□ 0.59
RNF25Q96BH1 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF25Q96BH1 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF25Q96BH1 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF25Q96BH1 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF25Q96BH1 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
RNF25Q96BH1 ATP5G1P1-201ENST00000448724 379 ntBASIC18.74■□□□□ 0.59
RNF25Q96BH1 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF25Q96BH1 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.74■□□□□ 0.59
RNF25Q96BH1 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.74■□□□□ 0.59
RNF25Q96BH1 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RNF25Q96BH1 AL441883.1-201ENST00000566170 1045 ntBASIC18.74■□□□□ 0.59
RNF25Q96BH1 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.74■□□□□ 0.59
RNF25Q96BH1 AC008687.5-201ENST00000593746 558 ntBASIC18.74■□□□□ 0.59
RNF25Q96BH1 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RNF25Q96BH1 Metazoa_SRP.91-201ENST00000622745 281 ntBASIC18.74■□□□□ 0.59
RNF25Q96BH1 AC079602.3-201ENST00000623931 403 ntBASIC18.74■□□□□ 0.59
RNF25Q96BH1 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF25Q96BH1 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF25Q96BH1 AC022211.2-201ENST00000585075 2527 ntBASIC18.74■□□□□ 0.59
RNF25Q96BH1 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF25Q96BH1 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
RNF25Q96BH1 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
RNF25Q96BH1 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF25Q96BH1 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF25Q96BH1 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
RNF25Q96BH1 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RNF25Q96BH1 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.74■□□□□ 0.59
RNF25Q96BH1 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF25Q96BH1 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF25Q96BH1 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms