Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SCAMP4Q969E2 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCAMP4Q969E2 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCAMP4Q969E2 AC138932.1-201ENST00000534164 6830 ntBASIC17.69■□□□□ 0.42
SCAMP4Q969E2 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
SCAMP4Q969E2 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SCAMP4Q969E2 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SCAMP4Q969E2 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.69■□□□□ 0.42
SCAMP4Q969E2 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCAMP4Q969E2 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.69■□□□□ 0.42
SCAMP4Q969E2 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SCAMP4Q969E2 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.69■□□□□ 0.42
SCAMP4Q969E2 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.69■□□□□ 0.42
SCAMP4Q969E2 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.69■□□□□ 0.42
SCAMP4Q969E2 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.69■□□□□ 0.42
SCAMP4Q969E2 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.69■□□□□ 0.42
SCAMP4Q969E2 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCAMP4Q969E2 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.69■□□□□ 0.42
SCAMP4Q969E2 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
SCAMP4Q969E2 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.69■□□□□ 0.42
SCAMP4Q969E2 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.69■□□□□ 0.42
SCAMP4Q969E2 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SCAMP4Q969E2 AL121894.2-201ENST00000602977 491 ntBASIC17.69■□□□□ 0.42
SCAMP4Q969E2 AL591684.3-201ENST00000605187 298 ntBASIC17.69■□□□□ 0.42
SCAMP4Q969E2 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SCAMP4Q969E2 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.69■□□□□ 0.42
SCAMP4Q969E2 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCAMP4Q969E2 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCAMP4Q969E2 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCAMP4Q969E2 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.69■□□□□ 0.42
SCAMP4Q969E2 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.69■□□□□ 0.42
SCAMP4Q969E2 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SCAMP4Q969E2 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SCAMP4Q969E2 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SCAMP4Q969E2 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SCAMP4Q969E2 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SCAMP4Q969E2 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCAMP4Q969E2 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCAMP4Q969E2 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCAMP4Q969E2 INTS4P1-201ENST00000438455 1935 ntBASIC17.68■□□□□ 0.42
SCAMP4Q969E2 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCAMP4Q969E2 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCAMP4Q969E2 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCAMP4Q969E2 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.68■□□□□ 0.42
SCAMP4Q969E2 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SCAMP4Q969E2 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SCAMP4Q969E2 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCAMP4Q969E2 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCAMP4Q969E2 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCAMP4Q969E2 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCAMP4Q969E2 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCAMP4Q969E2 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCAMP4Q969E2 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SCAMP4Q969E2 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCAMP4Q969E2 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.68■□□□□ 0.42
SCAMP4Q969E2 AC111152.3-201ENST00000569699 673 ntBASIC17.68■□□□□ 0.42
SCAMP4Q969E2 RN7SL510P-201ENST00000581311 263 ntBASIC17.68■□□□□ 0.42
SCAMP4Q969E2 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCAMP4Q969E2 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.68■□□□□ 0.42
SCAMP4Q969E2 NOC2LP1-202ENST00000452600 2235 ntBASIC17.68■□□□□ 0.42
SCAMP4Q969E2 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCAMP4Q969E2 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SCAMP4Q969E2 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SCAMP4Q969E2 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.68■□□□□ 0.42
SCAMP4Q969E2 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCAMP4Q969E2 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCAMP4Q969E2 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SCAMP4Q969E2 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.68■□□□□ 0.42
SCAMP4Q969E2 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCAMP4Q969E2 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.68■□□□□ 0.42
SCAMP4Q969E2 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCAMP4Q969E2 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCAMP4Q969E2 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCAMP4Q969E2 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.67■□□□□ 0.42
SCAMP4Q969E2 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCAMP4Q969E2 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.67■□□□□ 0.42
SCAMP4Q969E2 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCAMP4Q969E2 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SCAMP4Q969E2 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCAMP4Q969E2 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCAMP4Q969E2 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.67■□□□□ 0.42
SCAMP4Q969E2 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SCAMP4Q969E2 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.67■□□□□ 0.42
SCAMP4Q969E2 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SCAMP4Q969E2 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SCAMP4Q969E2 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.67■□□□□ 0.42
SCAMP4Q969E2 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SCAMP4Q969E2 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.67■□□□□ 0.42
SCAMP4Q969E2 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.67■□□□□ 0.42
SCAMP4Q969E2 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.67■□□□□ 0.42
SCAMP4Q969E2 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.67■□□□□ 0.42
SCAMP4Q969E2 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.67■□□□□ 0.42
SCAMP4Q969E2 BCL2-203ENST00000589955 5011 ntBASIC17.67■□□□□ 0.42
SCAMP4Q969E2 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SCAMP4Q969E2 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.67■□□□□ 0.42
SCAMP4Q969E2 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SCAMP4Q969E2 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.67■□□□□ 0.42
SCAMP4Q969E2 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
SCAMP4Q969E2 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.67■□□□□ 0.42
SCAMP4Q969E2 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms