Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
ATP2A3Q93084 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
ATP2A3Q93084 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATP2A3Q93084 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATP2A3Q93084 AC099343.3-201ENST00000605834 2503 ntBASIC18.79■□□□□ 0.6
ATP2A3Q93084 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP2A3Q93084 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP2A3Q93084 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
ATP2A3Q93084 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
ATP2A3Q93084 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP2A3Q93084 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP2A3Q93084 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.78■□□□□ 0.6
ATP2A3Q93084 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP2A3Q93084 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP2A3Q93084 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP2A3Q93084 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP2A3Q93084 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP2A3Q93084 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATP2A3Q93084 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP2A3Q93084 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP2A3Q93084 AC112777.1-201ENST00000540175 1423 ntBASIC18.78■□□□□ 0.6
ATP2A3Q93084 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP2A3Q93084 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATP2A3Q93084 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.78■□□□□ 0.6
ATP2A3Q93084 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP2A3Q93084 POM121L3P-201ENST00000419331 1163 ntBASIC18.78■□□□□ 0.6
ATP2A3Q93084 SAPCD2P3-201ENST00000455031 850 ntBASIC18.78■□□□□ 0.6
ATP2A3Q93084 AC091607.1-201ENST00000490318 1060 ntBASIC18.78■□□□□ 0.6
ATP2A3Q93084 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.78■□□□□ 0.6
ATP2A3Q93084 AP002469.2-201ENST00000531724 424 ntBASIC18.78■□□□□ 0.6
ATP2A3Q93084 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATP2A3Q93084 AL662844.1-201ENST00000546340 181 ntBASIC18.78■□□□□ 0.6
ATP2A3Q93084 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ATP2A3Q93084 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP2A3Q93084 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
ATP2A3Q93084 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP2A3Q93084 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP2A3Q93084 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.78■□□□□ 0.6
ATP2A3Q93084 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATP2A3Q93084 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
ATP2A3Q93084 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.78■□□□□ 0.6
ATP2A3Q93084 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP2A3Q93084 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATP2A3Q93084 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP2A3Q93084 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATP2A3Q93084 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.77■□□□□ 0.6
ATP2A3Q93084 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ATP2A3Q93084 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATP2A3Q93084 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATP2A3Q93084 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATP2A3Q93084 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATP2A3Q93084 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.77■□□□□ 0.6
ATP2A3Q93084 MYLKP1-201ENST00000509077 1580 ntBASIC18.77■□□□□ 0.6
ATP2A3Q93084 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ATP2A3Q93084 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATP2A3Q93084 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.77■□□□□ 0.6
ATP2A3Q93084 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATP2A3Q93084 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATP2A3Q93084 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATP2A3Q93084 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.77■□□□□ 0.6
ATP2A3Q93084 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.77■□□□□ 0.6
ATP2A3Q93084 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ATP2A3Q93084 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATP2A3Q93084 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.77■□□□□ 0.6
ATP2A3Q93084 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATP2A3Q93084 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
ATP2A3Q93084 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.77■□□□□ 0.6
ATP2A3Q93084 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.77■□□□□ 0.59
ATP2A3Q93084 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
ATP2A3Q93084 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
ATP2A3Q93084 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP2A3Q93084 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.76■□□□□ 0.59
ATP2A3Q93084 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ATP2A3Q93084 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.76■□□□□ 0.59
ATP2A3Q93084 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ATP2A3Q93084 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP2A3Q93084 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP2A3Q93084 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.76■□□□□ 0.59
ATP2A3Q93084 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP2A3Q93084 AC106795.1-205ENST00000512851 1056 ntBASIC18.76■□□□□ 0.59
ATP2A3Q93084 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP2A3Q93084 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.76■□□□□ 0.59
ATP2A3Q93084 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.76■□□□□ 0.59
ATP2A3Q93084 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP2A3Q93084 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.76■□□□□ 0.59
ATP2A3Q93084 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.76■□□□□ 0.59
ATP2A3Q93084 REXO1L6P-202ENST00000619970 1078 ntBASIC18.76■□□□□ 0.59
ATP2A3Q93084 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP2A3Q93084 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.76■□□□□ 0.59
ATP2A3Q93084 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
ATP2A3Q93084 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.76■□□□□ 0.59
ATP2A3Q93084 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.76■□□□□ 0.59
ATP2A3Q93084 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.76■□□□□ 0.59
ATP2A3Q93084 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ATP2A3Q93084 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
ATP2A3Q93084 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP2A3Q93084 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATP2A3Q93084 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.76■□□□□ 0.59
ATP2A3Q93084 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.76■□□□□ 0.59
ATP2A3Q93084 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms