Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HPS1Q92902 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HPS1Q92902 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.34■□□□□ 0.21
HPS1Q92902 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
HPS1Q92902 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.34■□□□□ 0.21
HPS1Q92902 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HPS1Q92902 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
HPS1Q92902 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HPS1Q92902 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.34■□□□□ 0.21
HPS1Q92902 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HPS1Q92902 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
HPS1Q92902 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HPS1Q92902 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.34■□□□□ 0.21
HPS1Q92902 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HPS1Q92902 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HPS1Q92902 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HPS1Q92902 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HPS1Q92902 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
HPS1Q92902 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.34■□□□□ 0.21
HPS1Q92902 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HPS1Q92902 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.34■□□□□ 0.21
HPS1Q92902 DGCR10-201ENST00000609839 495 ntBASIC16.34■□□□□ 0.21
HPS1Q92902 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
HPS1Q92902 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.34■□□□□ 0.21
HPS1Q92902 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.34■□□□□ 0.21
HPS1Q92902 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
HPS1Q92902 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
HPS1Q92902 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HPS1Q92902 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
HPS1Q92902 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HPS1Q92902 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.34■□□□□ 0.21
HPS1Q92902 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
HPS1Q92902 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.34■□□□□ 0.21
HPS1Q92902 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
HPS1Q92902 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HPS1Q92902 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.34■□□□□ 0.21
HPS1Q92902 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HPS1Q92902 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HPS1Q92902 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HPS1Q92902 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.34■□□□□ 0.21
HPS1Q92902 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
HPS1Q92902 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HPS1Q92902 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HPS1Q92902 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.33■□□□□ 0.21
HPS1Q92902 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
HPS1Q92902 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.33■□□□□ 0.21
HPS1Q92902 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.21
HPS1Q92902 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
HPS1Q92902 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
HPS1Q92902 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.33■□□□□ 0.2
HPS1Q92902 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
HPS1Q92902 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HPS1Q92902 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HPS1Q92902 AC113347.1-201ENST00000413321 391 ntBASIC16.33■□□□□ 0.2
HPS1Q92902 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.33■□□□□ 0.2
HPS1Q92902 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.33■□□□□ 0.2
HPS1Q92902 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.33■□□□□ 0.2
HPS1Q92902 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.33■□□□□ 0.2
HPS1Q92902 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.33■□□□□ 0.2
HPS1Q92902 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.33■□□□□ 0.2
HPS1Q92902 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.33■□□□□ 0.2
HPS1Q92902 RN7SL850P-201ENST00000579959 291 ntBASIC16.33■□□□□ 0.2
HPS1Q92902 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.33■□□□□ 0.2
HPS1Q92902 AL590326.2-201ENST00000625139 305 ntBASIC16.33■□□□□ 0.2
HPS1Q92902 HLA-A-209ENST00000638375 975 ntBASIC16.33■□□□□ 0.2
HPS1Q92902 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HPS1Q92902 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
HPS1Q92902 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HPS1Q92902 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HPS1Q92902 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HPS1Q92902 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HPS1Q92902 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HPS1Q92902 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.33■□□□□ 0.2
HPS1Q92902 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.33■□□□□ 0.2
HPS1Q92902 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HPS1Q92902 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
HPS1Q92902 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HPS1Q92902 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.33■□□□□ 0.2
HPS1Q92902 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.33■□□□□ 0.2
HPS1Q92902 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HPS1Q92902 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
HPS1Q92902 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
HPS1Q92902 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.32■□□□□ 0.2
HPS1Q92902 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
HPS1Q92902 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HPS1Q92902 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HPS1Q92902 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HPS1Q92902 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HPS1Q92902 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HPS1Q92902 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HPS1Q92902 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.32■□□□□ 0.2
HPS1Q92902 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HPS1Q92902 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HPS1Q92902 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.32■□□□□ 0.2
HPS1Q92902 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
HPS1Q92902 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HPS1Q92902 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HPS1Q92902 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HPS1Q92902 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.32■□□□□ 0.2
HPS1Q92902 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms