Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATL1Q8WXF7 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ATL1Q8WXF7 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATL1Q8WXF7 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATL1Q8WXF7 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATL1Q8WXF7 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ATL1Q8WXF7 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
ATL1Q8WXF7 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATL1Q8WXF7 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATL1Q8WXF7 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATL1Q8WXF7 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATL1Q8WXF7 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
ATL1Q8WXF7 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.43■□□□□ 0.38
ATL1Q8WXF7 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ATL1Q8WXF7 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ATL1Q8WXF7 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.43■□□□□ 0.38
ATL1Q8WXF7 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.43■□□□□ 0.38
ATL1Q8WXF7 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
ATL1Q8WXF7 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATL1Q8WXF7 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ATL1Q8WXF7 AC006116.8-202ENST00000587620 1550 ntBASIC17.43■□□□□ 0.38
ATL1Q8WXF7 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.43■□□□□ 0.38
ATL1Q8WXF7 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
ATL1Q8WXF7 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATL1Q8WXF7 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.43■□□□□ 0.38
ATL1Q8WXF7 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATL1Q8WXF7 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.43■□□□□ 0.38
ATL1Q8WXF7 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.43■□□□□ 0.38
ATL1Q8WXF7 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATL1Q8WXF7 Z83836.1-201ENST00000624605 1642 ntBASIC17.43■□□□□ 0.38
ATL1Q8WXF7 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
ATL1Q8WXF7 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.43■□□□□ 0.38
ATL1Q8WXF7 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ATL1Q8WXF7 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ATL1Q8WXF7 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATL1Q8WXF7 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.42■□□□□ 0.38
ATL1Q8WXF7 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATL1Q8WXF7 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATL1Q8WXF7 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
ATL1Q8WXF7 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATL1Q8WXF7 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATL1Q8WXF7 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATL1Q8WXF7 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ATL1Q8WXF7 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
ATL1Q8WXF7 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
ATL1Q8WXF7 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
ATL1Q8WXF7 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.42■□□□□ 0.38
ATL1Q8WXF7 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ATL1Q8WXF7 SPDYE13P-201ENST00000445314 798 ntBASIC17.42■□□□□ 0.38
ATL1Q8WXF7 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.42■□□□□ 0.38
ATL1Q8WXF7 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.42■□□□□ 0.38
ATL1Q8WXF7 AL136038.3-201ENST00000561909 1096 ntBASIC17.42■□□□□ 0.38
ATL1Q8WXF7 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.42■□□□□ 0.38
ATL1Q8WXF7 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ATL1Q8WXF7 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
ATL1Q8WXF7 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATL1Q8WXF7 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.42■□□□□ 0.38
ATL1Q8WXF7 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.42■□□□□ 0.38
ATL1Q8WXF7 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATL1Q8WXF7 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
ATL1Q8WXF7 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.42■□□□□ 0.38
ATL1Q8WXF7 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
ATL1Q8WXF7 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ATL1Q8WXF7 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATL1Q8WXF7 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
ATL1Q8WXF7 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
ATL1Q8WXF7 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
ATL1Q8WXF7 AC139713.2-201ENST00000641328 2723 ntBASIC17.41■□□□□ 0.38
ATL1Q8WXF7 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATL1Q8WXF7 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
ATL1Q8WXF7 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATL1Q8WXF7 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.41■□□□□ 0.38
ATL1Q8WXF7 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.41■□□□□ 0.38
ATL1Q8WXF7 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
ATL1Q8WXF7 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.41■□□□□ 0.38
ATL1Q8WXF7 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
ATL1Q8WXF7 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
ATL1Q8WXF7 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATL1Q8WXF7 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.41■□□□□ 0.38
ATL1Q8WXF7 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATL1Q8WXF7 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATL1Q8WXF7 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATL1Q8WXF7 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
ATL1Q8WXF7 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATL1Q8WXF7 AC112698.1-201ENST00000510299 916 ntBASIC17.41■□□□□ 0.38
ATL1Q8WXF7 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.41■□□□□ 0.38
ATL1Q8WXF7 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.41■□□□□ 0.38
ATL1Q8WXF7 AL590326.2-201ENST00000625139 305 ntBASIC17.41■□□□□ 0.38
ATL1Q8WXF7 AL121956.5-201ENST00000625261 221 ntBASIC17.41■□□□□ 0.38
ATL1Q8WXF7 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATL1Q8WXF7 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.41■□□□□ 0.38
ATL1Q8WXF7 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATL1Q8WXF7 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATL1Q8WXF7 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
ATL1Q8WXF7 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATL1Q8WXF7 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATL1Q8WXF7 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATL1Q8WXF7 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATL1Q8WXF7 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATL1Q8WXF7 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms