Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.24■□□□□ 0.03
SMIM4Q8WVI0 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.24■□□□□ 0.03
SMIM4Q8WVI0 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SMIM4Q8WVI0 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM4Q8WVI0 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
SMIM4Q8WVI0 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
SMIM4Q8WVI0 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM4Q8WVI0 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM4Q8WVI0 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM4Q8WVI0 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM4Q8WVI0 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.24■□□□□ 0.03
SMIM4Q8WVI0 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM4Q8WVI0 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM4Q8WVI0 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
SMIM4Q8WVI0 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM4Q8WVI0 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
SMIM4Q8WVI0 CROCCP5-201ENST00000436658 830 ntBASIC15.24■□□□□ 0.03
SMIM4Q8WVI0 GUSBP6-202ENST00000438529 1198 ntBASIC15.24■□□□□ 0.03
SMIM4Q8WVI0 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC15.24■□□□□ 0.03
SMIM4Q8WVI0 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC15.24■□□□□ 0.03
SMIM4Q8WVI0 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC15.24■□□□□ 0.03
SMIM4Q8WVI0 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC15.24■□□□□ 0.03
SMIM4Q8WVI0 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM4Q8WVI0 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC15.24■□□□□ 0.03
SMIM4Q8WVI0 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
SMIM4Q8WVI0 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM4Q8WVI0 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM4Q8WVI0 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM4Q8WVI0 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.24■□□□□ 0.03
SMIM4Q8WVI0 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM4Q8WVI0 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM4Q8WVI0 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM4Q8WVI0 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.24■□□□□ 0.03
SMIM4Q8WVI0 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM4Q8WVI0 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
SMIM4Q8WVI0 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.23■□□□□ 0.03
SMIM4Q8WVI0 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMIM4Q8WVI0 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
SMIM4Q8WVI0 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMIM4Q8WVI0 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMIM4Q8WVI0 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SMIM4Q8WVI0 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMIM4Q8WVI0 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMIM4Q8WVI0 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMIM4Q8WVI0 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMIM4Q8WVI0 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMIM4Q8WVI0 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMIM4Q8WVI0 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
SMIM4Q8WVI0 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.23■□□□□ 0.03
SMIM4Q8WVI0 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.23■□□□□ 0.03
SMIM4Q8WVI0 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.23■□□□□ 0.03
SMIM4Q8WVI0 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SMIM4Q8WVI0 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC15.23■□□□□ 0.03
SMIM4Q8WVI0 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
SMIM4Q8WVI0 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SMIM4Q8WVI0 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC15.23■□□□□ 0.03
SMIM4Q8WVI0 FAM207BP-201ENST00000447172 505 ntBASIC15.23■□□□□ 0.03
SMIM4Q8WVI0 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
SMIM4Q8WVI0 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC15.23■□□□□ 0.03
SMIM4Q8WVI0 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SMIM4Q8WVI0 AC009065.1-201ENST00000564055 1225 ntBASIC15.23■□□□□ 0.03
SMIM4Q8WVI0 AC026271.3-201ENST00000571884 352 ntBASIC15.23■□□□□ 0.03
SMIM4Q8WVI0 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC15.23■□□□□ 0.03
SMIM4Q8WVI0 MTDHP1-201ENST00000605323 784 ntBASIC15.23■□□□□ 0.03
SMIM4Q8WVI0 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SMIM4Q8WVI0 ABBA01031674.1-201ENST00000635145 728 ntBASIC15.23■□□□□ 0.03
SMIM4Q8WVI0 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SMIM4Q8WVI0 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SMIM4Q8WVI0 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.23■□□□□ 0.03
SMIM4Q8WVI0 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC15.23■□□□□ 0.03
SMIM4Q8WVI0 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMIM4Q8WVI0 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMIM4Q8WVI0 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMIM4Q8WVI0 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMIM4Q8WVI0 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.23■□□□□ 0.03
SMIM4Q8WVI0 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMIM4Q8WVI0 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SMIM4Q8WVI0 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.23■□□□□ 0.03
SMIM4Q8WVI0 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.23■□□□□ 0.03
SMIM4Q8WVI0 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.23■□□□□ 0.03
SMIM4Q8WVI0 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
SMIM4Q8WVI0 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SMIM4Q8WVI0 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SMIM4Q8WVI0 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
SMIM4Q8WVI0 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SMIM4Q8WVI0 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SMIM4Q8WVI0 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
SMIM4Q8WVI0 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMIM4Q8WVI0 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SMIM4Q8WVI0 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.22■□□□□ 0.03
SMIM4Q8WVI0 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SMIM4Q8WVI0 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMIM4Q8WVI0 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.22■□□□□ 0.03
SMIM4Q8WVI0 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SMIM4Q8WVI0 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMIM4Q8WVI0 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SMIM4Q8WVI0 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMIM4Q8WVI0 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.22■□□□□ 0.03
SMIM4Q8WVI0 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SMIM4Q8WVI0 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms