Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.53■□□□□ 0.24
CT55Q8WUE5 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CT55Q8WUE5 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CT55Q8WUE5 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CT55Q8WUE5 AC148477.5-201ENST00000625164 1645 ntBASIC16.53■□□□□ 0.24
CT55Q8WUE5 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.53■□□□□ 0.24
CT55Q8WUE5 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CT55Q8WUE5 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CT55Q8WUE5 RPSAP43-201ENST00000402237 625 ntBASIC16.53■□□□□ 0.24
CT55Q8WUE5 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.53■□□□□ 0.24
CT55Q8WUE5 ELK2BP-201ENST00000415014 1224 ntBASIC16.53■□□□□ 0.24
CT55Q8WUE5 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.53■□□□□ 0.24
CT55Q8WUE5 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.53■□□□□ 0.24
CT55Q8WUE5 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.53■□□□□ 0.24
CT55Q8WUE5 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CT55Q8WUE5 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.53■□□□□ 0.24
CT55Q8WUE5 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.53■□□□□ 0.24
CT55Q8WUE5 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CT55Q8WUE5 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CT55Q8WUE5 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.53■□□□□ 0.24
CT55Q8WUE5 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CT55Q8WUE5 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.53■□□□□ 0.24
CT55Q8WUE5 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CT55Q8WUE5 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.52■□□□□ 0.24
CT55Q8WUE5 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CT55Q8WUE5 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CT55Q8WUE5 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CT55Q8WUE5 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CT55Q8WUE5 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CT55Q8WUE5 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CT55Q8WUE5 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CT55Q8WUE5 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.52■□□□□ 0.24
CT55Q8WUE5 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.52■□□□□ 0.24
CT55Q8WUE5 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CT55Q8WUE5 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CT55Q8WUE5 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CT55Q8WUE5 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CT55Q8WUE5 AC100803.2-201ENST00000562459 1963 ntBASIC16.52■□□□□ 0.24
CT55Q8WUE5 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
CT55Q8WUE5 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CT55Q8WUE5 AC023274.1-201ENST00000418278 595 ntBASIC16.52■□□□□ 0.24
CT55Q8WUE5 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.52■□□□□ 0.24
CT55Q8WUE5 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.52■□□□□ 0.24
CT55Q8WUE5 DNAJB3-201ENST00000446806 729 ntBASIC16.52■□□□□ 0.24
CT55Q8WUE5 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
CT55Q8WUE5 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.52■□□□□ 0.24
CT55Q8WUE5 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.52■□□□□ 0.24
CT55Q8WUE5 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.52■□□□□ 0.24
CT55Q8WUE5 AC002347.1-201ENST00000569543 541 ntBASIC16.52■□□□□ 0.24
CT55Q8WUE5 AC109462.3-201ENST00000573934 613 ntBASIC16.52■□□□□ 0.24
CT55Q8WUE5 MIR3687-2-201ENST00000577708 61 ntBASIC16.52■□□□□ 0.24
CT55Q8WUE5 AC064836.3-201ENST00000607928 673 ntBASIC16.52■□□□□ 0.24
CT55Q8WUE5 AC019129.2-201ENST00000609837 1235 ntBASIC16.52■□□□□ 0.24
CT55Q8WUE5 AC116407.2-201ENST00000613639 860 ntBASIC16.52■□□□□ 0.24
CT55Q8WUE5 MIR3687-1-201ENST00000614492 61 ntBASIC16.52■□□□□ 0.24
CT55Q8WUE5 AC004706.3-202ENST00000621574 984 ntBASIC16.52■□□□□ 0.24
CT55Q8WUE5 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.52■□□□□ 0.24
CT55Q8WUE5 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CT55Q8WUE5 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CT55Q8WUE5 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.52■□□□□ 0.24
CT55Q8WUE5 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CT55Q8WUE5 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.52■□□□□ 0.24
CT55Q8WUE5 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.52■□□□□ 0.23
CT55Q8WUE5 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.52■□□□□ 0.23
CT55Q8WUE5 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
CT55Q8WUE5 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CT55Q8WUE5 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
CT55Q8WUE5 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC16.52■□□□□ 0.23
CT55Q8WUE5 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.52■□□□□ 0.23
CT55Q8WUE5 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CT55Q8WUE5 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
CT55Q8WUE5 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CT55Q8WUE5 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CT55Q8WUE5 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CT55Q8WUE5 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.51■□□□□ 0.23
CT55Q8WUE5 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CT55Q8WUE5 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CT55Q8WUE5 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CT55Q8WUE5 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.51■□□□□ 0.23
CT55Q8WUE5 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CT55Q8WUE5 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
CT55Q8WUE5 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CT55Q8WUE5 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CT55Q8WUE5 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CT55Q8WUE5 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CT55Q8WUE5 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CT55Q8WUE5 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CT55Q8WUE5 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CT55Q8WUE5 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CT55Q8WUE5 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CT55Q8WUE5 AC003669.1-201ENST00000334569 611 ntBASIC16.51■□□□□ 0.23
CT55Q8WUE5 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.51■□□□□ 0.23
CT55Q8WUE5 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CT55Q8WUE5 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CT55Q8WUE5 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.51■□□□□ 0.23
CT55Q8WUE5 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.51■□□□□ 0.23
CT55Q8WUE5 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CT55Q8WUE5 AC112482.1-201ENST00000492080 688 ntBASIC16.51■□□□□ 0.23
CT55Q8WUE5 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.51■□□□□ 0.23
CT55Q8WUE5 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms