Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
SNED1Q8TER0 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SNED1Q8TER0 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SNED1Q8TER0 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
SNED1Q8TER0 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SNED1Q8TER0 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC21.52■■□□□ 1.04
SNED1Q8TER0 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC21.52■■□□□ 1.04
SNED1Q8TER0 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SNED1Q8TER0 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
SNED1Q8TER0 AC018445.3-201ENST00000624177 1945 ntBASIC21.52■■□□□ 1.04
SNED1Q8TER0 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC21.52■■□□□ 1.04
SNED1Q8TER0 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
SNED1Q8TER0 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
SNED1Q8TER0 BCAR1-209ENST00000546196 1340 ntBASIC21.52■■□□□ 1.03
SNED1Q8TER0 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SNED1Q8TER0 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
SNED1Q8TER0 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SNED1Q8TER0 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC21.51■■□□□ 1.03
SNED1Q8TER0 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SNED1Q8TER0 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SNED1Q8TER0 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC21.51■■□□□ 1.03
SNED1Q8TER0 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC21.51■■□□□ 1.03
SNED1Q8TER0 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SNED1Q8TER0 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SNED1Q8TER0 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
SNED1Q8TER0 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
SNED1Q8TER0 ACTG1P14-201ENST00000446382 1122 ntBASIC21.51■■□□□ 1.03
SNED1Q8TER0 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
SNED1Q8TER0 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
SNED1Q8TER0 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC21.51■■□□□ 1.03
SNED1Q8TER0 AP000974.1-201ENST00000623909 2387 ntBASIC21.51■■□□□ 1.03
SNED1Q8TER0 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SNED1Q8TER0 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC21.51■■□□□ 1.03
SNED1Q8TER0 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SNED1Q8TER0 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SNED1Q8TER0 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SNED1Q8TER0 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SNED1Q8TER0 AC126763.1-201ENST00000552015 2118 ntBASIC21.51■■□□□ 1.03
SNED1Q8TER0 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SNED1Q8TER0 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SNED1Q8TER0 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
SNED1Q8TER0 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
SNED1Q8TER0 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SNED1Q8TER0 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SNED1Q8TER0 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SNED1Q8TER0 PTCHD3P3-201ENST00000403073 906 ntBASIC21.5■■□□□ 1.03
SNED1Q8TER0 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SNED1Q8TER0 WDR53-203ENST00000429115 683 ntTSL 2 BASIC21.5■■□□□ 1.03
SNED1Q8TER0 SIGLEC30P-201ENST00000455569 941 ntBASIC21.5■■□□□ 1.03
SNED1Q8TER0 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC21.5■■□□□ 1.03
SNED1Q8TER0 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC21.5■■□□□ 1.03
SNED1Q8TER0 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC21.5■■□□□ 1.03
SNED1Q8TER0 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SNED1Q8TER0 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SNED1Q8TER0 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SNED1Q8TER0 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC21.49■■□□□ 1.03
SNED1Q8TER0 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SNED1Q8TER0 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SNED1Q8TER0 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SNED1Q8TER0 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SNED1Q8TER0 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SNED1Q8TER0 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC21.49■■□□□ 1.03
SNED1Q8TER0 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
SNED1Q8TER0 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SNED1Q8TER0 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SNED1Q8TER0 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SNED1Q8TER0 AC004461.1-201ENST00000412461 403 ntBASIC21.49■■□□□ 1.03
SNED1Q8TER0 CD63-210ENST00000550776 870 ntTSL 5 BASIC21.49■■□□□ 1.03
SNED1Q8TER0 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC21.49■■□□□ 1.03
SNED1Q8TER0 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC21.49■■□□□ 1.03
SNED1Q8TER0 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC21.49■■□□□ 1.03
SNED1Q8TER0 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SNED1Q8TER0 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SNED1Q8TER0 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SNED1Q8TER0 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SNED1Q8TER0 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
SNED1Q8TER0 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
SNED1Q8TER0 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
SNED1Q8TER0 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.49■■□□□ 1.03
SNED1Q8TER0 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC21.49■■□□□ 1.03
SNED1Q8TER0 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
SNED1Q8TER0 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SNED1Q8TER0 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SNED1Q8TER0 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC21.48■■□□□ 1.03
SNED1Q8TER0 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SNED1Q8TER0 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SNED1Q8TER0 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SNED1Q8TER0 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SNED1Q8TER0 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
SNED1Q8TER0 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SNED1Q8TER0 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
SNED1Q8TER0 AC005498.2-205ENST00000593218 784 ntBASIC21.48■■□□□ 1.03
SNED1Q8TER0 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SNED1Q8TER0 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SNED1Q8TER0 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
SNED1Q8TER0 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SNED1Q8TER0 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
SNED1Q8TER0 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SNED1Q8TER0 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SNED1Q8TER0 AC025580.3-201ENST00000617932 1424 ntBASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms