Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
SH3RF3Q8TEJ3 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC21.08■□□□□ 0.96
SH3RF3Q8TEJ3 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC21.08■□□□□ 0.96
SH3RF3Q8TEJ3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
SH3RF3Q8TEJ3 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
SH3RF3Q8TEJ3 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
SH3RF3Q8TEJ3 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SH3RF3Q8TEJ3 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SH3RF3Q8TEJ3 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SH3RF3Q8TEJ3 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC21.07■□□□□ 0.96
SH3RF3Q8TEJ3 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC21.07■□□□□ 0.96
SH3RF3Q8TEJ3 MIR940-201ENST00000401276 94 ntBASIC21.07■□□□□ 0.96
SH3RF3Q8TEJ3 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC21.07■□□□□ 0.96
SH3RF3Q8TEJ3 KRT18P58-201ENST00000527480 1120 ntBASIC21.07■□□□□ 0.96
SH3RF3Q8TEJ3 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC21.07■□□□□ 0.96
SH3RF3Q8TEJ3 AC109462.3-201ENST00000573934 613 ntBASIC21.07■□□□□ 0.96
SH3RF3Q8TEJ3 CYB561-217ENST00000582997 877 ntTSL 5 BASIC21.07■□□□□ 0.96
SH3RF3Q8TEJ3 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC21.07■□□□□ 0.96
SH3RF3Q8TEJ3 AC116407.2-201ENST00000613639 860 ntBASIC21.07■□□□□ 0.96
SH3RF3Q8TEJ3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SH3RF3Q8TEJ3 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SH3RF3Q8TEJ3 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SH3RF3Q8TEJ3 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SH3RF3Q8TEJ3 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SH3RF3Q8TEJ3 PC-208ENST00000529047 1607 ntTSL 3 BASIC21.07■□□□□ 0.96
SH3RF3Q8TEJ3 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SH3RF3Q8TEJ3 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SH3RF3Q8TEJ3 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SH3RF3Q8TEJ3 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SH3RF3Q8TEJ3 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SH3RF3Q8TEJ3 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
SH3RF3Q8TEJ3 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SH3RF3Q8TEJ3 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.06■□□□□ 0.96
SH3RF3Q8TEJ3 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
SH3RF3Q8TEJ3 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SH3RF3Q8TEJ3 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
SH3RF3Q8TEJ3 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SH3RF3Q8TEJ3 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC21.06■□□□□ 0.96
SH3RF3Q8TEJ3 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SH3RF3Q8TEJ3 FUT8-AS1-201ENST00000621019 1521 ntBASIC21.06■□□□□ 0.96
SH3RF3Q8TEJ3 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SH3RF3Q8TEJ3 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SH3RF3Q8TEJ3 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
SH3RF3Q8TEJ3 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC21.06■□□□□ 0.96
SH3RF3Q8TEJ3 INIP-202ENST00000374236 874 ntTSL 2 BASIC21.06■□□□□ 0.96
SH3RF3Q8TEJ3 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC21.06■□□□□ 0.96
SH3RF3Q8TEJ3 LAGE3P1-201ENST00000425356 484 ntBASIC21.06■□□□□ 0.96
SH3RF3Q8TEJ3 PRYP5-201ENST00000451909 266 ntBASIC21.06■□□□□ 0.96
SH3RF3Q8TEJ3 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SH3RF3Q8TEJ3 RNA5SP415-201ENST00000517246 115 ntBASIC21.06■□□□□ 0.96
SH3RF3Q8TEJ3 AC145285.3-201ENST00000564603 959 ntBASIC21.06■□□□□ 0.96
SH3RF3Q8TEJ3 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC21.06■□□□□ 0.96
SH3RF3Q8TEJ3 COPE-211ENST00000600932 1144 ntTSL 5 BASIC21.06■□□□□ 0.96
SH3RF3Q8TEJ3 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SH3RF3Q8TEJ3 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC21.06■□□□□ 0.96
SH3RF3Q8TEJ3 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SH3RF3Q8TEJ3 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SH3RF3Q8TEJ3 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SH3RF3Q8TEJ3 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SH3RF3Q8TEJ3 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC21.06■□□□□ 0.96
SH3RF3Q8TEJ3 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SH3RF3Q8TEJ3 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.06■□□□□ 0.96
SH3RF3Q8TEJ3 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SH3RF3Q8TEJ3 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SH3RF3Q8TEJ3 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SH3RF3Q8TEJ3 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
SH3RF3Q8TEJ3 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
SH3RF3Q8TEJ3 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC21.05■□□□□ 0.96
SH3RF3Q8TEJ3 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC21.05■□□□□ 0.96
SH3RF3Q8TEJ3 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SH3RF3Q8TEJ3 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
SH3RF3Q8TEJ3 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC21.05■□□□□ 0.96
SH3RF3Q8TEJ3 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SH3RF3Q8TEJ3 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SH3RF3Q8TEJ3 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC21.05■□□□□ 0.96
SH3RF3Q8TEJ3 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SH3RF3Q8TEJ3 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC21.05■□□□□ 0.96
SH3RF3Q8TEJ3 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC21.05■□□□□ 0.96
SH3RF3Q8TEJ3 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC21.05■□□□□ 0.96
SH3RF3Q8TEJ3 DDX43P3-201ENST00000441064 443 ntBASIC21.05■□□□□ 0.96
SH3RF3Q8TEJ3 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC21.05■□□□□ 0.96
SH3RF3Q8TEJ3 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC21.05■□□□□ 0.96
SH3RF3Q8TEJ3 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SH3RF3Q8TEJ3 AC034105.1-201ENST00000563488 319 ntBASIC21.05■□□□□ 0.96
SH3RF3Q8TEJ3 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC21.05■□□□□ 0.96
SH3RF3Q8TEJ3 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC21.05■□□□□ 0.96
SH3RF3Q8TEJ3 AC117500.6-201ENST00000624871 588 ntBASIC21.05■□□□□ 0.96
SH3RF3Q8TEJ3 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC21.05■□□□□ 0.96
SH3RF3Q8TEJ3 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC21.05■□□□□ 0.96
SH3RF3Q8TEJ3 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SH3RF3Q8TEJ3 ZNF259P1-201ENST00000407656 1365 ntBASIC21.05■□□□□ 0.96
SH3RF3Q8TEJ3 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SH3RF3Q8TEJ3 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SH3RF3Q8TEJ3 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SH3RF3Q8TEJ3 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
SH3RF3Q8TEJ3 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SH3RF3Q8TEJ3 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SH3RF3Q8TEJ3 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC21.04■□□□□ 0.96
SH3RF3Q8TEJ3 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC21.04■□□□□ 0.96
SH3RF3Q8TEJ3 BX276092.7-203ENST00000637198 1536 ntBASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms