Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.6■□□□□ 0.57
CCHCR1Q8TD31 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCHCR1Q8TD31 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.6■□□□□ 0.57
CCHCR1Q8TD31 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCHCR1Q8TD31 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCHCR1Q8TD31 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCHCR1Q8TD31 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCHCR1Q8TD31 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCHCR1Q8TD31 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCHCR1Q8TD31 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCHCR1Q8TD31 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CCHCR1Q8TD31 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCHCR1Q8TD31 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.6■□□□□ 0.57
CCHCR1Q8TD31 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCHCR1Q8TD31 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCHCR1Q8TD31 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.6■□□□□ 0.57
CCHCR1Q8TD31 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCHCR1Q8TD31 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCHCR1Q8TD31 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCHCR1Q8TD31 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCHCR1Q8TD31 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.59■□□□□ 0.57
CCHCR1Q8TD31 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCHCR1Q8TD31 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.59■□□□□ 0.57
CCHCR1Q8TD31 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCHCR1Q8TD31 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCHCR1Q8TD31 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCHCR1Q8TD31 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCHCR1Q8TD31 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCHCR1Q8TD31 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCHCR1Q8TD31 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.59■□□□□ 0.57
CCHCR1Q8TD31 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.59■□□□□ 0.57
CCHCR1Q8TD31 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.59■□□□□ 0.57
CCHCR1Q8TD31 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.59■□□□□ 0.57
CCHCR1Q8TD31 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCHCR1Q8TD31 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.59■□□□□ 0.57
CCHCR1Q8TD31 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.59■□□□□ 0.57
CCHCR1Q8TD31 AC139887.4-201ENST00000607877 719 ntBASIC18.59■□□□□ 0.57
CCHCR1Q8TD31 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.59■□□□□ 0.57
CCHCR1Q8TD31 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CCHCR1Q8TD31 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCHCR1Q8TD31 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
CCHCR1Q8TD31 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.59■□□□□ 0.57
CCHCR1Q8TD31 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.59■□□□□ 0.57
CCHCR1Q8TD31 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCHCR1Q8TD31 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.59■□□□□ 0.57
CCHCR1Q8TD31 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
CCHCR1Q8TD31 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCHCR1Q8TD31 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.59■□□□□ 0.57
CCHCR1Q8TD31 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CCHCR1Q8TD31 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.58■□□□□ 0.57
CCHCR1Q8TD31 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.58■□□□□ 0.57
CCHCR1Q8TD31 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCHCR1Q8TD31 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.58■□□□□ 0.57
CCHCR1Q8TD31 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
CCHCR1Q8TD31 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.58■□□□□ 0.57
CCHCR1Q8TD31 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCHCR1Q8TD31 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCHCR1Q8TD31 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCHCR1Q8TD31 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.58■□□□□ 0.56
CCHCR1Q8TD31 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCHCR1Q8TD31 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.58■□□□□ 0.56
CCHCR1Q8TD31 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CCHCR1Q8TD31 AK4P3-201ENST00000418260 669 ntBASIC18.58■□□□□ 0.56
CCHCR1Q8TD31 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCHCR1Q8TD31 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCHCR1Q8TD31 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCHCR1Q8TD31 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.58■□□□□ 0.56
CCHCR1Q8TD31 AC024243.1-201ENST00000609234 778 ntBASIC18.58■□□□□ 0.56
CCHCR1Q8TD31 AL023973.1-201ENST00000624619 620 ntBASIC18.58■□□□□ 0.56
CCHCR1Q8TD31 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.58■□□□□ 0.56
CCHCR1Q8TD31 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCHCR1Q8TD31 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.58■□□□□ 0.56
CCHCR1Q8TD31 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.58■□□□□ 0.56
CCHCR1Q8TD31 AL138688.1-201ENST00000624851 1594 ntBASIC18.58■□□□□ 0.56
CCHCR1Q8TD31 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCHCR1Q8TD31 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.58■□□□□ 0.56
CCHCR1Q8TD31 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCHCR1Q8TD31 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCHCR1Q8TD31 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCHCR1Q8TD31 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCHCR1Q8TD31 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.58■□□□□ 0.56
CCHCR1Q8TD31 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCHCR1Q8TD31 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.57■□□□□ 0.56
CCHCR1Q8TD31 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.57■□□□□ 0.56
CCHCR1Q8TD31 AC133963.1-201ENST00000504166 1679 ntBASIC18.57■□□□□ 0.56
CCHCR1Q8TD31 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCHCR1Q8TD31 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCHCR1Q8TD31 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CCHCR1Q8TD31 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CCHCR1Q8TD31 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.57■□□□□ 0.56
CCHCR1Q8TD31 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCHCR1Q8TD31 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCHCR1Q8TD31 AC108860.2-201ENST00000562760 2183 ntBASIC18.57■□□□□ 0.56
CCHCR1Q8TD31 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCHCR1Q8TD31 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCHCR1Q8TD31 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCHCR1Q8TD31 AC117947.1-201ENST00000427448 529 ntBASIC18.57■□□□□ 0.56
CCHCR1Q8TD31 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.57■□□□□ 0.56
CCHCR1Q8TD31 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.57■□□□□ 0.56
CCHCR1Q8TD31 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms