Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC20.71■□□□□ 0.91
NEDD1Q8NHV4 AC132938.5-201ENST00000624980 1813 ntBASIC20.71■□□□□ 0.91
NEDD1Q8NHV4 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
NEDD1Q8NHV4 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NEDD1Q8NHV4 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
NEDD1Q8NHV4 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NEDD1Q8NHV4 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
NEDD1Q8NHV4 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NEDD1Q8NHV4 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.71■□□□□ 0.91
NEDD1Q8NHV4 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NEDD1Q8NHV4 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
NEDD1Q8NHV4 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.71■□□□□ 0.91
NEDD1Q8NHV4 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NEDD1Q8NHV4 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NEDD1Q8NHV4 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.71■□□□□ 0.91
NEDD1Q8NHV4 SPDYE21P-201ENST00000413323 827 ntBASIC20.71■□□□□ 0.91
NEDD1Q8NHV4 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.71■□□□□ 0.91
NEDD1Q8NHV4 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NEDD1Q8NHV4 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
NEDD1Q8NHV4 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
NEDD1Q8NHV4 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.71■□□□□ 0.91
NEDD1Q8NHV4 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NEDD1Q8NHV4 AC025062.2-201ENST00000605477 670 ntBASIC20.71■□□□□ 0.91
NEDD1Q8NHV4 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NEDD1Q8NHV4 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NEDD1Q8NHV4 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NEDD1Q8NHV4 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NEDD1Q8NHV4 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NEDD1Q8NHV4 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.91
NEDD1Q8NHV4 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC20.7■□□□□ 0.91
NEDD1Q8NHV4 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NEDD1Q8NHV4 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.7■□□□□ 0.9
NEDD1Q8NHV4 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.7■□□□□ 0.9
NEDD1Q8NHV4 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.7■□□□□ 0.9
NEDD1Q8NHV4 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NEDD1Q8NHV4 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NEDD1Q8NHV4 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.7■□□□□ 0.9
NEDD1Q8NHV4 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NEDD1Q8NHV4 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NEDD1Q8NHV4 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
NEDD1Q8NHV4 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NEDD1Q8NHV4 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
NEDD1Q8NHV4 AC079776.4-201ENST00000511039 504 ntBASIC20.7■□□□□ 0.9
NEDD1Q8NHV4 AC109462.3-201ENST00000573934 613 ntBASIC20.7■□□□□ 0.9
NEDD1Q8NHV4 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.7■□□□□ 0.9
NEDD1Q8NHV4 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
NEDD1Q8NHV4 FAM215A-202ENST00000632077 792 ntBASIC20.7■□□□□ 0.9
NEDD1Q8NHV4 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NEDD1Q8NHV4 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NEDD1Q8NHV4 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
NEDD1Q8NHV4 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
NEDD1Q8NHV4 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NEDD1Q8NHV4 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NEDD1Q8NHV4 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
NEDD1Q8NHV4 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
NEDD1Q8NHV4 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
NEDD1Q8NHV4 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NEDD1Q8NHV4 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NEDD1Q8NHV4 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
NEDD1Q8NHV4 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.69■□□□□ 0.9
NEDD1Q8NHV4 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NEDD1Q8NHV4 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NEDD1Q8NHV4 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
NEDD1Q8NHV4 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NEDD1Q8NHV4 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.69■□□□□ 0.9
NEDD1Q8NHV4 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NEDD1Q8NHV4 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NEDD1Q8NHV4 PRYP5-201ENST00000451909 266 ntBASIC20.69■□□□□ 0.9
NEDD1Q8NHV4 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.69■□□□□ 0.9
NEDD1Q8NHV4 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.69■□□□□ 0.9
NEDD1Q8NHV4 MTDHP4-201ENST00000600287 670 ntBASIC20.69■□□□□ 0.9
NEDD1Q8NHV4 AL049840.3-201ENST00000602669 611 ntBASIC20.69■□□□□ 0.9
NEDD1Q8NHV4 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NEDD1Q8NHV4 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NEDD1Q8NHV4 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.69■□□□□ 0.9
NEDD1Q8NHV4 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
NEDD1Q8NHV4 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NEDD1Q8NHV4 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NEDD1Q8NHV4 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
NEDD1Q8NHV4 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NEDD1Q8NHV4 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.69■□□□□ 0.9
NEDD1Q8NHV4 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NEDD1Q8NHV4 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NEDD1Q8NHV4 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
NEDD1Q8NHV4 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NEDD1Q8NHV4 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
NEDD1Q8NHV4 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
NEDD1Q8NHV4 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.68■□□□□ 0.9
NEDD1Q8NHV4 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NEDD1Q8NHV4 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NEDD1Q8NHV4 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
NEDD1Q8NHV4 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
NEDD1Q8NHV4 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NEDD1Q8NHV4 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.68■□□□□ 0.9
NEDD1Q8NHV4 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.68■□□□□ 0.9
NEDD1Q8NHV4 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.68■□□□□ 0.9
NEDD1Q8NHV4 AC005104.2-201ENST00000427818 678 ntBASIC20.68■□□□□ 0.9
NEDD1Q8NHV4 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NEDD1Q8NHV4 RPS2P1-201ENST00000434010 821 ntBASIC20.68■□□□□ 0.9
NEDD1Q8NHV4 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms