Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
RTL9Q8NET4 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
RTL9Q8NET4 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RTL9Q8NET4 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
RTL9Q8NET4 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
RTL9Q8NET4 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RTL9Q8NET4 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
RTL9Q8NET4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RTL9Q8NET4 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.84■■□□□ 1.09
RTL9Q8NET4 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RTL9Q8NET4 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RTL9Q8NET4 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RTL9Q8NET4 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RTL9Q8NET4 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RTL9Q8NET4 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RTL9Q8NET4 AC009949.1-201ENST00000623048 1830 ntBASIC21.84■■□□□ 1.09
RTL9Q8NET4 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC21.84■■□□□ 1.09
RTL9Q8NET4 AC136632.2-201ENST00000512891 861 ntBASIC21.84■■□□□ 1.09
RTL9Q8NET4 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC21.84■■□□□ 1.09
RTL9Q8NET4 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC21.84■■□□□ 1.09
RTL9Q8NET4 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC21.84■■□□□ 1.09
RTL9Q8NET4 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RTL9Q8NET4 AC004706.3-202ENST00000621574 984 ntBASIC21.84■■□□□ 1.09
RTL9Q8NET4 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
RTL9Q8NET4 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RTL9Q8NET4 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC21.84■■□□□ 1.09
RTL9Q8NET4 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RTL9Q8NET4 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RTL9Q8NET4 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RTL9Q8NET4 PC-208ENST00000529047 1607 ntTSL 3 BASIC21.83■■□□□ 1.09
RTL9Q8NET4 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC21.83■■□□□ 1.09
RTL9Q8NET4 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC21.83■■□□□ 1.09
RTL9Q8NET4 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
RTL9Q8NET4 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC21.83■■□□□ 1.09
RTL9Q8NET4 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC21.83■■□□□ 1.09
RTL9Q8NET4 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RTL9Q8NET4 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.83■■□□□ 1.09
RTL9Q8NET4 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RTL9Q8NET4 AC120498.9-201ENST00000339021 3867 ntBASIC21.83■■□□□ 1.09
RTL9Q8NET4 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RTL9Q8NET4 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RTL9Q8NET4 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RTL9Q8NET4 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
RTL9Q8NET4 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC21.83■■□□□ 1.08
RTL9Q8NET4 YBX2P1-201ENST00000394192 760 ntBASIC21.83■■□□□ 1.08
RTL9Q8NET4 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
RTL9Q8NET4 GGCT-205ENST00000409436 954 ntTSL 3 BASIC21.83■■□□□ 1.08
RTL9Q8NET4 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC21.83■■□□□ 1.08
RTL9Q8NET4 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC21.83■■□□□ 1.08
RTL9Q8NET4 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
RTL9Q8NET4 FIS1-203ENST00000442303 631 ntTSL 3 BASIC21.83■■□□□ 1.08
RTL9Q8NET4 NKTR-203ENST00000442970 646 ntTSL 2 BASIC21.83■■□□□ 1.08
RTL9Q8NET4 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RTL9Q8NET4 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.08
RTL9Q8NET4 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
RTL9Q8NET4 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC21.83■■□□□ 1.08
RTL9Q8NET4 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC21.83■■□□□ 1.08
RTL9Q8NET4 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
RTL9Q8NET4 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
RTL9Q8NET4 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RTL9Q8NET4 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.83■■□□□ 1.08
RTL9Q8NET4 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC21.83■■□□□ 1.08
RTL9Q8NET4 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
RTL9Q8NET4 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
RTL9Q8NET4 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC21.83■■□□□ 1.08
RTL9Q8NET4 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC21.82■■□□□ 1.08
RTL9Q8NET4 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RTL9Q8NET4 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
RTL9Q8NET4 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
RTL9Q8NET4 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
RTL9Q8NET4 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RTL9Q8NET4 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC21.82■■□□□ 1.08
RTL9Q8NET4 HARS-201ENST00000307633 1780 ntTSL 2 BASIC21.82■■□□□ 1.08
RTL9Q8NET4 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC21.82■■□□□ 1.08
RTL9Q8NET4 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RTL9Q8NET4 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RTL9Q8NET4 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC21.82■■□□□ 1.08
RTL9Q8NET4 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RTL9Q8NET4 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RTL9Q8NET4 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC21.82■■□□□ 1.08
RTL9Q8NET4 ELK2BP-201ENST00000415014 1224 ntBASIC21.82■■□□□ 1.08
RTL9Q8NET4 HMGN1P19-201ENST00000436976 333 ntBASIC21.82■■□□□ 1.08
RTL9Q8NET4 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC21.82■■□□□ 1.08
RTL9Q8NET4 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
RTL9Q8NET4 KRT18P3-201ENST00000451602 1288 ntBASIC21.82■■□□□ 1.08
RTL9Q8NET4 ARTN-206ENST00000472435 402 ntTSL 3 BASIC21.82■■□□□ 1.08
RTL9Q8NET4 AC002558.1-201ENST00000488906 803 ntBASIC21.82■■□□□ 1.08
RTL9Q8NET4 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC21.82■■□□□ 1.08
RTL9Q8NET4 CYB561-217ENST00000582997 877 ntTSL 5 BASIC21.82■■□□□ 1.08
RTL9Q8NET4 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC21.82■■□□□ 1.08
RTL9Q8NET4 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RTL9Q8NET4 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RTL9Q8NET4 GID4-202ENST00000376345 1391 ntTSL 3 BASIC21.81■■□□□ 1.08
RTL9Q8NET4 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RTL9Q8NET4 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC21.81■■□□□ 1.08
RTL9Q8NET4 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC21.81■■□□□ 1.08
RTL9Q8NET4 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
RTL9Q8NET4 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RTL9Q8NET4 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
RTL9Q8NET4 MADD-208ENST00000405573 1823 ntTSL 5 BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms