Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
CCDC89Q8N998 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
CCDC89Q8N998 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CCDC89Q8N998 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC89Q8N998 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.52■□□□□ 0.56
CCDC89Q8N998 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC89Q8N998 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC89Q8N998 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC89Q8N998 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC89Q8N998 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.55
CCDC89Q8N998 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC89Q8N998 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC89Q8N998 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CCDC89Q8N998 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC89Q8N998 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
CCDC89Q8N998 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.51■□□□□ 0.55
CCDC89Q8N998 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CCDC89Q8N998 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.51■□□□□ 0.55
CCDC89Q8N998 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.51■□□□□ 0.55
CCDC89Q8N998 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC89Q8N998 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.51■□□□□ 0.55
CCDC89Q8N998 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC89Q8N998 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC89Q8N998 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC89Q8N998 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC89Q8N998 PCDHA12-202ENST00000613593 2588 ntBASIC18.51■□□□□ 0.55
CCDC89Q8N998 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC89Q8N998 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC89Q8N998 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC89Q8N998 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC89Q8N998 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC89Q8N998 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC89Q8N998 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC89Q8N998 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC89Q8N998 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC89Q8N998 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC89Q8N998 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC89Q8N998 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CCDC89Q8N998 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC89Q8N998 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC89Q8N998 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC89Q8N998 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC89Q8N998 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC89Q8N998 CROCCP1-201ENST00000426910 5675 ntBASIC18.5■□□□□ 0.55
CCDC89Q8N998 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC89Q8N998 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC89Q8N998 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC89Q8N998 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC89Q8N998 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC89Q8N998 PVRIG2P-201ENST00000435460 978 ntBASIC18.5■□□□□ 0.55
CCDC89Q8N998 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC89Q8N998 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.5■□□□□ 0.55
CCDC89Q8N998 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CCDC89Q8N998 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC89Q8N998 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC89Q8N998 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CCDC89Q8N998 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC89Q8N998 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC89Q8N998 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC89Q8N998 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC89Q8N998 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC89Q8N998 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC89Q8N998 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC89Q8N998 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC89Q8N998 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CCDC89Q8N998 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC89Q8N998 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CCDC89Q8N998 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC89Q8N998 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CCDC89Q8N998 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.5■□□□□ 0.55
CCDC89Q8N998 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC89Q8N998 LINC00602-201ENST00000629776 2065 ntBASIC18.5■□□□□ 0.55
CCDC89Q8N998 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC89Q8N998 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC89Q8N998 AP001094.4-201ENST00000579008 2176 ntBASIC18.49■□□□□ 0.55
CCDC89Q8N998 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC89Q8N998 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CCDC89Q8N998 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC89Q8N998 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC89Q8N998 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC89Q8N998 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC89Q8N998 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC89Q8N998 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC89Q8N998 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC89Q8N998 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC89Q8N998 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC89Q8N998 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC89Q8N998 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC89Q8N998 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.49■□□□□ 0.55
CCDC89Q8N998 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC89Q8N998 AL157888.1-201ENST00000631930 593 ntBASIC18.49■□□□□ 0.55
CCDC89Q8N998 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
CCDC89Q8N998 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CCDC89Q8N998 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.49■□□□□ 0.55
CCDC89Q8N998 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC89Q8N998 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC89Q8N998 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC89Q8N998 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC89Q8N998 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CCDC89Q8N998 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms