Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 MTDHP4-201ENST00000600287 670 ntBASIC27.73■■■□□ 2.03
VPS8Q8N3P4 FAM215A-202ENST00000632077 792 ntBASIC27.73■■■□□ 2.03
VPS8Q8N3P4 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC27.73■■■□□ 2.03
VPS8Q8N3P4 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
VPS8Q8N3P4 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC27.73■■■□□ 2.03
VPS8Q8N3P4 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
VPS8Q8N3P4 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
VPS8Q8N3P4 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
VPS8Q8N3P4 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
VPS8Q8N3P4 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC27.72■■■□□ 2.03
VPS8Q8N3P4 NME9-203ENST00000383180 2133 ntTSL 2 BASIC27.72■■■□□ 2.03
VPS8Q8N3P4 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC27.72■■■□□ 2.03
VPS8Q8N3P4 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC27.72■■■□□ 2.03
VPS8Q8N3P4 AC012317.2-201ENST00000623305 2251 ntBASIC27.72■■■□□ 2.03
VPS8Q8N3P4 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC27.72■■■□□ 2.03
VPS8Q8N3P4 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC27.72■■■□□ 2.03
VPS8Q8N3P4 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC27.72■■■□□ 2.03
VPS8Q8N3P4 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC27.72■■■□□ 2.03
VPS8Q8N3P4 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC27.71■■■□□ 2.03
VPS8Q8N3P4 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
VPS8Q8N3P4 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC27.71■■■□□ 2.03
VPS8Q8N3P4 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
VPS8Q8N3P4 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC27.71■■■□□ 2.03
VPS8Q8N3P4 RPS2P1-201ENST00000434010 821 ntBASIC27.71■■■□□ 2.03
VPS8Q8N3P4 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC27.71■■■□□ 2.03
VPS8Q8N3P4 AL022326.1-202ENST00000641533 845 ntBASIC27.71■■■□□ 2.03
VPS8Q8N3P4 AC107918.4-202ENST00000641623 219 ntBASIC27.71■■■□□ 2.03
VPS8Q8N3P4 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC27.71■■■□□ 2.03
VPS8Q8N3P4 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC27.71■■■□□ 2.03
VPS8Q8N3P4 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
VPS8Q8N3P4 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
VPS8Q8N3P4 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC27.7■■■□□ 2.03
VPS8Q8N3P4 GATB-213ENST00000515812 1893 ntTSL 5 BASIC27.7■■■□□ 2.03
VPS8Q8N3P4 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC27.7■■■□□ 2.03
VPS8Q8N3P4 AC012640.2-201ENST00000561606 901 ntBASIC27.7■■■□□ 2.03
VPS8Q8N3P4 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC27.7■■■□□ 2.02
VPS8Q8N3P4 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
VPS8Q8N3P4 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC27.7■■■□□ 2.02
VPS8Q8N3P4 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
VPS8Q8N3P4 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC27.7■■■□□ 2.02
VPS8Q8N3P4 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
VPS8Q8N3P4 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC27.69■■■□□ 2.02
VPS8Q8N3P4 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC27.69■■■□□ 2.02
VPS8Q8N3P4 PODN-203ENST00000395871 2744 ntTSL 5 BASIC27.69■■■□□ 2.02
VPS8Q8N3P4 AL020989.1-201ENST00000422979 469 ntBASIC27.69■■■□□ 2.02
VPS8Q8N3P4 KRT18P27-201ENST00000427733 1299 ntBASIC27.69■■■□□ 2.02
VPS8Q8N3P4 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC27.69■■■□□ 2.02
VPS8Q8N3P4 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC27.69■■■□□ 2.02
VPS8Q8N3P4 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC27.69■■■□□ 2.02
VPS8Q8N3P4 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
VPS8Q8N3P4 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC27.69■■■□□ 2.02
VPS8Q8N3P4 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
VPS8Q8N3P4 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC27.69■■■□□ 2.02
VPS8Q8N3P4 AC004817.3-201ENST00000602957 2129 ntBASIC27.69■■■□□ 2.02
VPS8Q8N3P4 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC27.69■■■□□ 2.02
VPS8Q8N3P4 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC27.69■■■□□ 2.02
VPS8Q8N3P4 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
VPS8Q8N3P4 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC27.69■■■□□ 2.02
VPS8Q8N3P4 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
VPS8Q8N3P4 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
VPS8Q8N3P4 AMT-250ENST00000637682 1823 ntTSL 5 BASIC27.69■■■□□ 2.02
VPS8Q8N3P4 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
VPS8Q8N3P4 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC27.68■■■□□ 2.02
VPS8Q8N3P4 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC27.68■■■□□ 2.02
VPS8Q8N3P4 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC27.68■■■□□ 2.02
VPS8Q8N3P4 LAGE3P1-201ENST00000425356 484 ntBASIC27.68■■■□□ 2.02
VPS8Q8N3P4 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC27.68■■■□□ 2.02
VPS8Q8N3P4 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC27.68■■■□□ 2.02
VPS8Q8N3P4 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC27.68■■■□□ 2.02
VPS8Q8N3P4 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC27.68■■■□□ 2.02
VPS8Q8N3P4 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC27.68■■■□□ 2.02
VPS8Q8N3P4 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
VPS8Q8N3P4 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
VPS8Q8N3P4 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
VPS8Q8N3P4 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC27.68■■■□□ 2.02
VPS8Q8N3P4 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC27.68■■■□□ 2.02
VPS8Q8N3P4 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
VPS8Q8N3P4 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC27.68■■■□□ 2.02
VPS8Q8N3P4 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC27.68■■■□□ 2.02
VPS8Q8N3P4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC27.68■■■□□ 2.02
VPS8Q8N3P4 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
VPS8Q8N3P4 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC27.67■■■□□ 2.02
VPS8Q8N3P4 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC27.67■■■□□ 2.02
VPS8Q8N3P4 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
VPS8Q8N3P4 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
VPS8Q8N3P4 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC27.67■■■□□ 2.02
VPS8Q8N3P4 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC27.67■■■□□ 2.02
VPS8Q8N3P4 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC27.67■■■□□ 2.02
VPS8Q8N3P4 SDCCAG3P1-201ENST00000589292 1150 ntBASIC27.67■■■□□ 2.02
VPS8Q8N3P4 AC064862.7-201ENST00000604520 867 ntBASIC27.67■■■□□ 2.02
VPS8Q8N3P4 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC27.67■■■□□ 2.02
VPS8Q8N3P4 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC27.67■■■□□ 2.02
VPS8Q8N3P4 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
VPS8Q8N3P4 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC27.67■■■□□ 2.02
VPS8Q8N3P4 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC27.67■■■□□ 2.02
VPS8Q8N3P4 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
VPS8Q8N3P4 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC27.67■■■□□ 2.02
VPS8Q8N3P4 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC27.67■■■□□ 2.02
VPS8Q8N3P4 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC27.67■■■□□ 2.02
VPS8Q8N3P4 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC27.67■■■□□ 2.02
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms