Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CCDC170Q8IYT3 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
CCDC170Q8IYT3 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC170Q8IYT3 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC170Q8IYT3 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC170Q8IYT3 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC170Q8IYT3 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
CCDC170Q8IYT3 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC170Q8IYT3 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC170Q8IYT3 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC170Q8IYT3 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC170Q8IYT3 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC170Q8IYT3 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC170Q8IYT3 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC170Q8IYT3 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CCDC170Q8IYT3 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.14■□□□□ 0.66
CCDC170Q8IYT3 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC19.14■□□□□ 0.66
CCDC170Q8IYT3 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CCDC170Q8IYT3 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.14■□□□□ 0.66
CCDC170Q8IYT3 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CCDC170Q8IYT3 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC170Q8IYT3 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC170Q8IYT3 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC170Q8IYT3 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC170Q8IYT3 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC170Q8IYT3 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC170Q8IYT3 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.14■□□□□ 0.65
CCDC170Q8IYT3 AL390955.1-201ENST00000428694 934 ntBASIC19.14■□□□□ 0.65
CCDC170Q8IYT3 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.14■□□□□ 0.65
CCDC170Q8IYT3 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC170Q8IYT3 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC170Q8IYT3 EGLN1P1-201ENST00000531623 762 ntBASIC19.14■□□□□ 0.65
CCDC170Q8IYT3 NEK4P2-201ENST00000580004 1012 ntBASIC19.14■□□□□ 0.65
CCDC170Q8IYT3 MIR4785-201ENST00000585005 73 ntBASIC19.14■□□□□ 0.65
CCDC170Q8IYT3 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC170Q8IYT3 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.14■□□□□ 0.65
CCDC170Q8IYT3 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC170Q8IYT3 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC170Q8IYT3 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC170Q8IYT3 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC170Q8IYT3 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.14■□□□□ 0.65
CCDC170Q8IYT3 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC170Q8IYT3 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CCDC170Q8IYT3 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC170Q8IYT3 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC170Q8IYT3 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC170Q8IYT3 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC19.14■□□□□ 0.65
CCDC170Q8IYT3 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC170Q8IYT3 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC170Q8IYT3 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC170Q8IYT3 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC170Q8IYT3 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC170Q8IYT3 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC170Q8IYT3 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
CCDC170Q8IYT3 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC170Q8IYT3 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC170Q8IYT3 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC170Q8IYT3 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CCDC170Q8IYT3 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC170Q8IYT3 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC170Q8IYT3 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CCDC170Q8IYT3 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC170Q8IYT3 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC170Q8IYT3 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC170Q8IYT3 KRT18P65-201ENST00000439811 1286 ntBASIC19.13■□□□□ 0.65
CCDC170Q8IYT3 AC009947.2-201ENST00000444014 672 ntBASIC19.13■□□□□ 0.65
CCDC170Q8IYT3 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC170Q8IYT3 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC170Q8IYT3 AL512604.3-201ENST00000569583 964 ntBASIC19.13■□□□□ 0.65
CCDC170Q8IYT3 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC170Q8IYT3 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CCDC170Q8IYT3 AC016396.2-201ENST00000562575 1417 ntBASIC19.13■□□□□ 0.65
CCDC170Q8IYT3 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC170Q8IYT3 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC170Q8IYT3 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC170Q8IYT3 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC170Q8IYT3 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC170Q8IYT3 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC170Q8IYT3 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC170Q8IYT3 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC170Q8IYT3 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CCDC170Q8IYT3 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC170Q8IYT3 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC170Q8IYT3 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
CCDC170Q8IYT3 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC170Q8IYT3 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CCDC170Q8IYT3 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC170Q8IYT3 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC170Q8IYT3 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.12■□□□□ 0.65
CCDC170Q8IYT3 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
CCDC170Q8IYT3 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC170Q8IYT3 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC170Q8IYT3 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC170Q8IYT3 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC170Q8IYT3 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC170Q8IYT3 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC170Q8IYT3 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC170Q8IYT3 MIR1238-201ENST00000408483 83 ntBASIC19.12■□□□□ 0.65
CCDC170Q8IYT3 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC170Q8IYT3 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms