Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 KRT18P23-201ENST00000435622 1283 ntBASIC17.81■□□□□ 0.44
TRIM42Q8IWZ5 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM42Q8IWZ5 CA15P1-201ENST00000481698 905 ntBASIC17.81■□□□□ 0.44
TRIM42Q8IWZ5 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.81■□□□□ 0.44
TRIM42Q8IWZ5 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM42Q8IWZ5 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM42Q8IWZ5 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.81■□□□□ 0.44
TRIM42Q8IWZ5 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM42Q8IWZ5 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.81■□□□□ 0.44
TRIM42Q8IWZ5 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TRIM42Q8IWZ5 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM42Q8IWZ5 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
TRIM42Q8IWZ5 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM42Q8IWZ5 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM42Q8IWZ5 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM42Q8IWZ5 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM42Q8IWZ5 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM42Q8IWZ5 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM42Q8IWZ5 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM42Q8IWZ5 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.8■□□□□ 0.44
TRIM42Q8IWZ5 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM42Q8IWZ5 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM42Q8IWZ5 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM42Q8IWZ5 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM42Q8IWZ5 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM42Q8IWZ5 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.8■□□□□ 0.44
TRIM42Q8IWZ5 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TRIM42Q8IWZ5 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM42Q8IWZ5 RPS2P55-201ENST00000397318 883 ntBASIC17.8■□□□□ 0.44
TRIM42Q8IWZ5 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
TRIM42Q8IWZ5 AC107956.1-201ENST00000494359 873 ntBASIC17.8■□□□□ 0.44
TRIM42Q8IWZ5 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM42Q8IWZ5 RARRES2P10-201ENST00000564312 460 ntBASIC17.8■□□□□ 0.44
TRIM42Q8IWZ5 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM42Q8IWZ5 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM42Q8IWZ5 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM42Q8IWZ5 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM42Q8IWZ5 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.8■□□□□ 0.44
TRIM42Q8IWZ5 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM42Q8IWZ5 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM42Q8IWZ5 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM42Q8IWZ5 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.8■□□□□ 0.44
TRIM42Q8IWZ5 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
TRIM42Q8IWZ5 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM42Q8IWZ5 AL135905.2-201ENST00000584934 1404 ntBASIC17.8■□□□□ 0.44
TRIM42Q8IWZ5 LINC00304-203ENST00000565008 1864 ntBASIC17.8■□□□□ 0.44
TRIM42Q8IWZ5 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM42Q8IWZ5 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM42Q8IWZ5 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM42Q8IWZ5 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TRIM42Q8IWZ5 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM42Q8IWZ5 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM42Q8IWZ5 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TRIM42Q8IWZ5 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM42Q8IWZ5 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM42Q8IWZ5 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM42Q8IWZ5 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM42Q8IWZ5 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.79■□□□□ 0.44
TRIM42Q8IWZ5 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM42Q8IWZ5 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
TRIM42Q8IWZ5 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM42Q8IWZ5 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM42Q8IWZ5 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
TRIM42Q8IWZ5 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM42Q8IWZ5 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
TRIM42Q8IWZ5 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM42Q8IWZ5 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
TRIM42Q8IWZ5 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.79■□□□□ 0.44
TRIM42Q8IWZ5 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM42Q8IWZ5 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM42Q8IWZ5 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM42Q8IWZ5 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM42Q8IWZ5 AL596275.1-201ENST00000423464 877 ntBASIC17.79■□□□□ 0.44
TRIM42Q8IWZ5 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.79■□□□□ 0.44
TRIM42Q8IWZ5 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
TRIM42Q8IWZ5 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.79■□□□□ 0.44
TRIM42Q8IWZ5 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM42Q8IWZ5 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM42Q8IWZ5 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TRIM42Q8IWZ5 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM42Q8IWZ5 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM42Q8IWZ5 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM42Q8IWZ5 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.79■□□□□ 0.44
TRIM42Q8IWZ5 AL024508.2-201ENST00000607749 1894 ntBASIC17.79■□□□□ 0.44
TRIM42Q8IWZ5 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM42Q8IWZ5 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM42Q8IWZ5 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM42Q8IWZ5 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TRIM42Q8IWZ5 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM42Q8IWZ5 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM42Q8IWZ5 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM42Q8IWZ5 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM42Q8IWZ5 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM42Q8IWZ5 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM42Q8IWZ5 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TRIM42Q8IWZ5 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM42Q8IWZ5 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM42Q8IWZ5 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM42Q8IWZ5 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM42Q8IWZ5 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms