Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NUDCD3Q8IVD9 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NUDCD3Q8IVD9 ID1-201ENST00000376105 1233 ntBASIC17.73■□□□□ 0.43
NUDCD3Q8IVD9 AP003041.3-201ENST00000527151 707 ntBASIC17.73■□□□□ 0.43
NUDCD3Q8IVD9 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.73■□□□□ 0.43
NUDCD3Q8IVD9 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
NUDCD3Q8IVD9 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.73■□□□□ 0.43
NUDCD3Q8IVD9 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.73■□□□□ 0.43
NUDCD3Q8IVD9 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
NUDCD3Q8IVD9 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.73■□□□□ 0.43
NUDCD3Q8IVD9 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NUDCD3Q8IVD9 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NUDCD3Q8IVD9 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NUDCD3Q8IVD9 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NUDCD3Q8IVD9 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NUDCD3Q8IVD9 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
NUDCD3Q8IVD9 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.72■□□□□ 0.43
NUDCD3Q8IVD9 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NUDCD3Q8IVD9 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
NUDCD3Q8IVD9 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.72■□□□□ 0.43
NUDCD3Q8IVD9 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
NUDCD3Q8IVD9 AL118508.1-201ENST00000613502 2345 ntBASIC17.72■□□□□ 0.43
NUDCD3Q8IVD9 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NUDCD3Q8IVD9 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NUDCD3Q8IVD9 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NUDCD3Q8IVD9 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.72■□□□□ 0.43
NUDCD3Q8IVD9 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NUDCD3Q8IVD9 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
NUDCD3Q8IVD9 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NUDCD3Q8IVD9 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.72■□□□□ 0.43
NUDCD3Q8IVD9 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NUDCD3Q8IVD9 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
NUDCD3Q8IVD9 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NUDCD3Q8IVD9 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
NUDCD3Q8IVD9 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
NUDCD3Q8IVD9 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.72■□□□□ 0.43
NUDCD3Q8IVD9 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NUDCD3Q8IVD9 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NUDCD3Q8IVD9 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NUDCD3Q8IVD9 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NUDCD3Q8IVD9 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NUDCD3Q8IVD9 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
NUDCD3Q8IVD9 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
NUDCD3Q8IVD9 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.71■□□□□ 0.43
NUDCD3Q8IVD9 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.71■□□□□ 0.43
NUDCD3Q8IVD9 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NUDCD3Q8IVD9 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.71■□□□□ 0.43
NUDCD3Q8IVD9 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NUDCD3Q8IVD9 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NUDCD3Q8IVD9 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.71■□□□□ 0.43
NUDCD3Q8IVD9 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NUDCD3Q8IVD9 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NUDCD3Q8IVD9 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.71■□□□□ 0.43
NUDCD3Q8IVD9 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.71■□□□□ 0.43
NUDCD3Q8IVD9 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.71■□□□□ 0.43
NUDCD3Q8IVD9 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.71■□□□□ 0.43
NUDCD3Q8IVD9 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.71■□□□□ 0.43
NUDCD3Q8IVD9 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
NUDCD3Q8IVD9 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.71■□□□□ 0.43
NUDCD3Q8IVD9 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NUDCD3Q8IVD9 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NUDCD3Q8IVD9 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
NUDCD3Q8IVD9 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.71■□□□□ 0.43
NUDCD3Q8IVD9 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
NUDCD3Q8IVD9 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.42
NUDCD3Q8IVD9 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
NUDCD3Q8IVD9 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NUDCD3Q8IVD9 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NUDCD3Q8IVD9 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
NUDCD3Q8IVD9 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.7■□□□□ 0.42
NUDCD3Q8IVD9 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NUDCD3Q8IVD9 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NUDCD3Q8IVD9 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
NUDCD3Q8IVD9 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NUDCD3Q8IVD9 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NUDCD3Q8IVD9 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
NUDCD3Q8IVD9 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NUDCD3Q8IVD9 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NUDCD3Q8IVD9 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.7■□□□□ 0.42
NUDCD3Q8IVD9 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.7■□□□□ 0.42
NUDCD3Q8IVD9 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.7■□□□□ 0.42
NUDCD3Q8IVD9 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NUDCD3Q8IVD9 AL359736.2-201ENST00000621992 437 ntBASIC17.7■□□□□ 0.42
NUDCD3Q8IVD9 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NUDCD3Q8IVD9 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.7■□□□□ 0.42
NUDCD3Q8IVD9 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
NUDCD3Q8IVD9 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NUDCD3Q8IVD9 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
NUDCD3Q8IVD9 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.7■□□□□ 0.42
NUDCD3Q8IVD9 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.7■□□□□ 0.42
NUDCD3Q8IVD9 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NUDCD3Q8IVD9 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.7■□□□□ 0.42
NUDCD3Q8IVD9 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
NUDCD3Q8IVD9 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NUDCD3Q8IVD9 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NUDCD3Q8IVD9 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
NUDCD3Q8IVD9 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NUDCD3Q8IVD9 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NUDCD3Q8IVD9 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NUDCD3Q8IVD9 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms