Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.37□□□□□ -0.11
C9orf139Q6ZV77 IGHV3-22-201ENST00000520721 359 ntBASIC14.37□□□□□ -0.11
C9orf139Q6ZV77 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.37□□□□□ -0.11
C9orf139Q6ZV77 AC005082.1-201ENST00000413042 2259 ntBASIC14.37□□□□□ -0.11
C9orf139Q6ZV77 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
C9orf139Q6ZV77 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
C9orf139Q6ZV77 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C9orf139Q6ZV77 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C9orf139Q6ZV77 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C9orf139Q6ZV77 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
C9orf139Q6ZV77 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
C9orf139Q6ZV77 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C9orf139Q6ZV77 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
C9orf139Q6ZV77 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C9orf139Q6ZV77 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C9orf139Q6ZV77 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C9orf139Q6ZV77 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
C9orf139Q6ZV77 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
C9orf139Q6ZV77 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C9orf139Q6ZV77 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C9orf139Q6ZV77 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC14.36□□□□□ -0.11
C9orf139Q6ZV77 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
C9orf139Q6ZV77 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
C9orf139Q6ZV77 PMPCAP1-201ENST00000508114 1576 ntBASIC14.36□□□□□ -0.11
C9orf139Q6ZV77 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC14.36□□□□□ -0.11
C9orf139Q6ZV77 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
C9orf139Q6ZV77 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C9orf139Q6ZV77 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
C9orf139Q6ZV77 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
C9orf139Q6ZV77 AC103564.2-201ENST00000432853 1299 ntBASIC14.36□□□□□ -0.11
C9orf139Q6ZV77 RPS2P1-201ENST00000434010 821 ntBASIC14.36□□□□□ -0.11
C9orf139Q6ZV77 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
C9orf139Q6ZV77 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.36□□□□□ -0.11
C9orf139Q6ZV77 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.36□□□□□ -0.11
C9orf139Q6ZV77 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.36□□□□□ -0.11
C9orf139Q6ZV77 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
C9orf139Q6ZV77 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.36□□□□□ -0.11
C9orf139Q6ZV77 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
C9orf139Q6ZV77 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
C9orf139Q6ZV77 AC008735.5-201ENST00000623544 497 ntBASIC14.36□□□□□ -0.11
C9orf139Q6ZV77 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.36□□□□□ -0.11
C9orf139Q6ZV77 AC107918.4-202ENST00000641623 219 ntBASIC14.36□□□□□ -0.11
C9orf139Q6ZV77 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
C9orf139Q6ZV77 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
C9orf139Q6ZV77 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
C9orf139Q6ZV77 AC079776.2-201ENST00000641154 1609 ntBASIC14.36□□□□□ -0.11
C9orf139Q6ZV77 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C9orf139Q6ZV77 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC14.36□□□□□ -0.11
C9orf139Q6ZV77 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
C9orf139Q6ZV77 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
C9orf139Q6ZV77 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
C9orf139Q6ZV77 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
C9orf139Q6ZV77 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
C9orf139Q6ZV77 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C9orf139Q6ZV77 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
C9orf139Q6ZV77 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
C9orf139Q6ZV77 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC14.35□□□□□ -0.11
C9orf139Q6ZV77 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C9orf139Q6ZV77 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C9orf139Q6ZV77 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
C9orf139Q6ZV77 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C9orf139Q6ZV77 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
C9orf139Q6ZV77 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C9orf139Q6ZV77 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
C9orf139Q6ZV77 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
C9orf139Q6ZV77 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
C9orf139Q6ZV77 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.35□□□□□ -0.11
C9orf139Q6ZV77 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC14.35□□□□□ -0.11
C9orf139Q6ZV77 LAGE3P1-201ENST00000425356 484 ntBASIC14.35□□□□□ -0.11
C9orf139Q6ZV77 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.35□□□□□ -0.11
C9orf139Q6ZV77 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.35□□□□□ -0.11
C9orf139Q6ZV77 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.35□□□□□ -0.11
C9orf139Q6ZV77 NKAPP1-205ENST00000585790 367 ntBASIC14.35□□□□□ -0.11
C9orf139Q6ZV77 MTDHP4-201ENST00000600287 670 ntBASIC14.35□□□□□ -0.11
C9orf139Q6ZV77 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
C9orf139Q6ZV77 AD001527.2-201ENST00000622994 785 ntBASIC14.35□□□□□ -0.11
C9orf139Q6ZV77 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
C9orf139Q6ZV77 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
C9orf139Q6ZV77 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
C9orf139Q6ZV77 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C9orf139Q6ZV77 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
C9orf139Q6ZV77 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC14.35□□□□□ -0.11
C9orf139Q6ZV77 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
C9orf139Q6ZV77 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
C9orf139Q6ZV77 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
C9orf139Q6ZV77 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC14.35□□□□□ -0.11
C9orf139Q6ZV77 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.35□□□□□ -0.11
C9orf139Q6ZV77 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C9orf139Q6ZV77 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC14.35□□□□□ -0.11
C9orf139Q6ZV77 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
C9orf139Q6ZV77 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC14.35□□□□□ -0.11
C9orf139Q6ZV77 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC14.35□□□□□ -0.11
C9orf139Q6ZV77 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C9orf139Q6ZV77 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C9orf139Q6ZV77 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.34□□□□□ -0.11
C9orf139Q6ZV77 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC14.34□□□□□ -0.11
C9orf139Q6ZV77 PHGDH-209ENST00000641074 1780 ntBASIC14.34□□□□□ -0.11
C9orf139Q6ZV77 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
C9orf139Q6ZV77 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC14.34□□□□□ -0.11
C9orf139Q6ZV77 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms