Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
NIPAL1Q6NVV3 AL353692.3-201ENST00000407031 1396 ntBASIC17.19■□□□□ 0.34
NIPAL1Q6NVV3 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NIPAL1Q6NVV3 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.19■□□□□ 0.34
NIPAL1Q6NVV3 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.19■□□□□ 0.34
NIPAL1Q6NVV3 TSPY22P-201ENST00000427496 604 ntBASIC17.19■□□□□ 0.34
NIPAL1Q6NVV3 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.19■□□□□ 0.34
NIPAL1Q6NVV3 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.19■□□□□ 0.34
NIPAL1Q6NVV3 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NIPAL1Q6NVV3 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.19■□□□□ 0.34
NIPAL1Q6NVV3 AL358472.4-201ENST00000633140 710 ntBASIC17.19■□□□□ 0.34
NIPAL1Q6NVV3 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NIPAL1Q6NVV3 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
NIPAL1Q6NVV3 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NIPAL1Q6NVV3 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NIPAL1Q6NVV3 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
NIPAL1Q6NVV3 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NIPAL1Q6NVV3 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.19■□□□□ 0.34
NIPAL1Q6NVV3 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NIPAL1Q6NVV3 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NIPAL1Q6NVV3 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NIPAL1Q6NVV3 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.19■□□□□ 0.34
NIPAL1Q6NVV3 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.19■□□□□ 0.34
NIPAL1Q6NVV3 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
NIPAL1Q6NVV3 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NIPAL1Q6NVV3 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NIPAL1Q6NVV3 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NIPAL1Q6NVV3 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NIPAL1Q6NVV3 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NIPAL1Q6NVV3 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NIPAL1Q6NVV3 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
NIPAL1Q6NVV3 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
NIPAL1Q6NVV3 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
NIPAL1Q6NVV3 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NIPAL1Q6NVV3 Z83836.1-201ENST00000624605 1642 ntBASIC17.18■□□□□ 0.34
NIPAL1Q6NVV3 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.18■□□□□ 0.34
NIPAL1Q6NVV3 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
NIPAL1Q6NVV3 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NIPAL1Q6NVV3 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
NIPAL1Q6NVV3 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
NIPAL1Q6NVV3 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.18■□□□□ 0.34
NIPAL1Q6NVV3 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NIPAL1Q6NVV3 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NIPAL1Q6NVV3 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.18■□□□□ 0.34
NIPAL1Q6NVV3 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NIPAL1Q6NVV3 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NIPAL1Q6NVV3 KRT18P65-201ENST00000439811 1286 ntBASIC17.18■□□□□ 0.34
NIPAL1Q6NVV3 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NIPAL1Q6NVV3 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NIPAL1Q6NVV3 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NIPAL1Q6NVV3 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.18■□□□□ 0.34
NIPAL1Q6NVV3 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NIPAL1Q6NVV3 AC069148.1-201ENST00000608741 768 ntBASIC17.18■□□□□ 0.34
NIPAL1Q6NVV3 AC009154.2-201ENST00000621177 724 ntBASIC17.18■□□□□ 0.34
NIPAL1Q6NVV3 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.18■□□□□ 0.34
NIPAL1Q6NVV3 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.18■□□□□ 0.34
NIPAL1Q6NVV3 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.18■□□□□ 0.34
NIPAL1Q6NVV3 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
NIPAL1Q6NVV3 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NIPAL1Q6NVV3 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NIPAL1Q6NVV3 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NIPAL1Q6NVV3 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.18■□□□□ 0.34
NIPAL1Q6NVV3 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NIPAL1Q6NVV3 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.18■□□□□ 0.34
NIPAL1Q6NVV3 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.18■□□□□ 0.34
NIPAL1Q6NVV3 AC022898.2-201ENST00000616822 1312 ntBASIC17.18■□□□□ 0.34
NIPAL1Q6NVV3 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.18■□□□□ 0.34
NIPAL1Q6NVV3 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NIPAL1Q6NVV3 AC018695.7-201ENST00000624587 2492 ntBASIC17.18■□□□□ 0.34
NIPAL1Q6NVV3 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
NIPAL1Q6NVV3 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NIPAL1Q6NVV3 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
NIPAL1Q6NVV3 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NIPAL1Q6NVV3 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.17■□□□□ 0.34
NIPAL1Q6NVV3 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.17■□□□□ 0.34
NIPAL1Q6NVV3 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NIPAL1Q6NVV3 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
NIPAL1Q6NVV3 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NIPAL1Q6NVV3 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.17■□□□□ 0.34
NIPAL1Q6NVV3 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
NIPAL1Q6NVV3 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
NIPAL1Q6NVV3 TSPY12P-201ENST00000421279 868 ntBASIC17.17■□□□□ 0.34
NIPAL1Q6NVV3 MST1L-201ENST00000442552 2185 ntBASIC17.17■□□□□ 0.34
NIPAL1Q6NVV3 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NIPAL1Q6NVV3 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.17■□□□□ 0.34
NIPAL1Q6NVV3 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.17■□□□□ 0.34
NIPAL1Q6NVV3 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.17■□□□□ 0.34
NIPAL1Q6NVV3 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.17■□□□□ 0.34
NIPAL1Q6NVV3 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.17■□□□□ 0.34
NIPAL1Q6NVV3 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NIPAL1Q6NVV3 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.17■□□□□ 0.34
NIPAL1Q6NVV3 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.17■□□□□ 0.34
NIPAL1Q6NVV3 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
NIPAL1Q6NVV3 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.17■□□□□ 0.34
NIPAL1Q6NVV3 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NIPAL1Q6NVV3 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.17■□□□□ 0.34
NIPAL1Q6NVV3 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NIPAL1Q6NVV3 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
NIPAL1Q6NVV3 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
NIPAL1Q6NVV3 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms