Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SWSAP1Q6NVH7 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SWSAP1Q6NVH7 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SWSAP1Q6NVH7 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SWSAP1Q6NVH7 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SWSAP1Q6NVH7 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
SWSAP1Q6NVH7 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SWSAP1Q6NVH7 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SWSAP1Q6NVH7 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SWSAP1Q6NVH7 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
SWSAP1Q6NVH7 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.8■□□□□ 0.76
SWSAP1Q6NVH7 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SWSAP1Q6NVH7 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.8■□□□□ 0.76
SWSAP1Q6NVH7 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.8■□□□□ 0.76
SWSAP1Q6NVH7 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.8■□□□□ 0.76
SWSAP1Q6NVH7 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SWSAP1Q6NVH7 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
SWSAP1Q6NVH7 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SWSAP1Q6NVH7 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.8■□□□□ 0.76
SWSAP1Q6NVH7 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SWSAP1Q6NVH7 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SWSAP1Q6NVH7 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SWSAP1Q6NVH7 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SWSAP1Q6NVH7 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SWSAP1Q6NVH7 AC103564.2-201ENST00000432853 1299 ntBASIC19.8■□□□□ 0.76
SWSAP1Q6NVH7 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SWSAP1Q6NVH7 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.8■□□□□ 0.76
SWSAP1Q6NVH7 RNA5SP419-201ENST00000515908 135 ntBASIC19.8■□□□□ 0.76
SWSAP1Q6NVH7 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SWSAP1Q6NVH7 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.8■□□□□ 0.76
SWSAP1Q6NVH7 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SWSAP1Q6NVH7 AL773604.1-201ENST00000617417 272 ntBASIC19.8■□□□□ 0.76
SWSAP1Q6NVH7 AD001527.2-201ENST00000622994 785 ntBASIC19.8■□□□□ 0.76
SWSAP1Q6NVH7 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SWSAP1Q6NVH7 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SWSAP1Q6NVH7 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SWSAP1Q6NVH7 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SWSAP1Q6NVH7 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SWSAP1Q6NVH7 AL356309.3-201ENST00000624132 1934 ntBASIC19.8■□□□□ 0.76
SWSAP1Q6NVH7 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SWSAP1Q6NVH7 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.8■□□□□ 0.76
SWSAP1Q6NVH7 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.8■□□□□ 0.76
SWSAP1Q6NVH7 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.79■□□□□ 0.76
SWSAP1Q6NVH7 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.79■□□□□ 0.76
SWSAP1Q6NVH7 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SWSAP1Q6NVH7 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.79■□□□□ 0.76
SWSAP1Q6NVH7 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SWSAP1Q6NVH7 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SWSAP1Q6NVH7 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.79■□□□□ 0.76
SWSAP1Q6NVH7 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.79■□□□□ 0.76
SWSAP1Q6NVH7 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SWSAP1Q6NVH7 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SWSAP1Q6NVH7 AC073648.2-201ENST00000510116 352 ntBASIC19.79■□□□□ 0.76
SWSAP1Q6NVH7 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.79■□□□□ 0.76
SWSAP1Q6NVH7 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
SWSAP1Q6NVH7 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.79■□□□□ 0.76
SWSAP1Q6NVH7 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.79■□□□□ 0.76
SWSAP1Q6NVH7 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.79■□□□□ 0.76
SWSAP1Q6NVH7 KRT18P55-202ENST00000578578 1546 ntBASIC19.79■□□□□ 0.76
SWSAP1Q6NVH7 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SWSAP1Q6NVH7 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SWSAP1Q6NVH7 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.79■□□□□ 0.76
SWSAP1Q6NVH7 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SWSAP1Q6NVH7 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.79■□□□□ 0.76
SWSAP1Q6NVH7 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.79■□□□□ 0.76
SWSAP1Q6NVH7 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SWSAP1Q6NVH7 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SWSAP1Q6NVH7 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.79■□□□□ 0.76
SWSAP1Q6NVH7 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SWSAP1Q6NVH7 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SWSAP1Q6NVH7 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.79■□□□□ 0.76
SWSAP1Q6NVH7 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.79■□□□□ 0.76
SWSAP1Q6NVH7 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SWSAP1Q6NVH7 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SWSAP1Q6NVH7 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SWSAP1Q6NVH7 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SWSAP1Q6NVH7 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SWSAP1Q6NVH7 PMPCAP1-201ENST00000508114 1576 ntBASIC19.78■□□□□ 0.76
SWSAP1Q6NVH7 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SWSAP1Q6NVH7 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SWSAP1Q6NVH7 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SWSAP1Q6NVH7 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SWSAP1Q6NVH7 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.78■□□□□ 0.76
SWSAP1Q6NVH7 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SWSAP1Q6NVH7 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.78■□□□□ 0.76
SWSAP1Q6NVH7 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SWSAP1Q6NVH7 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC19.78■□□□□ 0.76
SWSAP1Q6NVH7 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SWSAP1Q6NVH7 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SWSAP1Q6NVH7 AL031284.1-201ENST00000419297 478 ntBASIC19.78■□□□□ 0.76
SWSAP1Q6NVH7 HNRNPDP1-201ENST00000439535 754 ntBASIC19.78■□□□□ 0.76
SWSAP1Q6NVH7 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.78■□□□□ 0.76
SWSAP1Q6NVH7 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.78■□□□□ 0.76
SWSAP1Q6NVH7 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SWSAP1Q6NVH7 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.78■□□□□ 0.76
SWSAP1Q6NVH7 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.78■□□□□ 0.76
SWSAP1Q6NVH7 AC021087.4-201ENST00000563761 564 ntBASIC19.78■□□□□ 0.76
SWSAP1Q6NVH7 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.78■□□□□ 0.76
SWSAP1Q6NVH7 AP001005.1-201ENST00000571755 1248 ntBASIC19.78■□□□□ 0.76
SWSAP1Q6NVH7 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms