Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PPP4R3AQ6IN85 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.25■□□□□ 0.83
PPP4R3AQ6IN85 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
PPP4R3AQ6IN85 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
PPP4R3AQ6IN85 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PPP4R3AQ6IN85 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PPP4R3AQ6IN85 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PPP4R3AQ6IN85 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
PPP4R3AQ6IN85 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PPP4R3AQ6IN85 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PPP4R3AQ6IN85 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PPP4R3AQ6IN85 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PPP4R3AQ6IN85 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PPP4R3AQ6IN85 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PPP4R3AQ6IN85 KRT17P6-201ENST00000453795 1220 ntBASIC20.25■□□□□ 0.83
PPP4R3AQ6IN85 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PPP4R3AQ6IN85 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.25■□□□□ 0.83
PPP4R3AQ6IN85 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.25■□□□□ 0.83
PPP4R3AQ6IN85 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.25■□□□□ 0.83
PPP4R3AQ6IN85 AC012615.1-201ENST00000565797 1299 ntBASIC20.25■□□□□ 0.83
PPP4R3AQ6IN85 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.25■□□□□ 0.83
PPP4R3AQ6IN85 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.25■□□□□ 0.83
PPP4R3AQ6IN85 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PPP4R3AQ6IN85 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.25■□□□□ 0.83
PPP4R3AQ6IN85 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PPP4R3AQ6IN85 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PPP4R3AQ6IN85 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PPP4R3AQ6IN85 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PPP4R3AQ6IN85 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PPP4R3AQ6IN85 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.25■□□□□ 0.83
PPP4R3AQ6IN85 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.25■□□□□ 0.83
PPP4R3AQ6IN85 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
PPP4R3AQ6IN85 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.24■□□□□ 0.83
PPP4R3AQ6IN85 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PPP4R3AQ6IN85 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PPP4R3AQ6IN85 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PPP4R3AQ6IN85 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
PPP4R3AQ6IN85 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PPP4R3AQ6IN85 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PPP4R3AQ6IN85 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
PPP4R3AQ6IN85 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.24■□□□□ 0.83
PPP4R3AQ6IN85 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PPP4R3AQ6IN85 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
PPP4R3AQ6IN85 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PPP4R3AQ6IN85 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PPP4R3AQ6IN85 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PPP4R3AQ6IN85 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
PPP4R3AQ6IN85 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PPP4R3AQ6IN85 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
PPP4R3AQ6IN85 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PPP4R3AQ6IN85 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.24■□□□□ 0.83
PPP4R3AQ6IN85 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PPP4R3AQ6IN85 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.24■□□□□ 0.83
PPP4R3AQ6IN85 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
PPP4R3AQ6IN85 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
PPP4R3AQ6IN85 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PPP4R3AQ6IN85 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.24■□□□□ 0.83
PPP4R3AQ6IN85 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PPP4R3AQ6IN85 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PPP4R3AQ6IN85 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PPP4R3AQ6IN85 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
PPP4R3AQ6IN85 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.24■□□□□ 0.83
PPP4R3AQ6IN85 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
PPP4R3AQ6IN85 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
PPP4R3AQ6IN85 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.23■□□□□ 0.83
PPP4R3AQ6IN85 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PPP4R3AQ6IN85 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
PPP4R3AQ6IN85 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PPP4R3AQ6IN85 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.23■□□□□ 0.83
PPP4R3AQ6IN85 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PPP4R3AQ6IN85 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PPP4R3AQ6IN85 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PPP4R3AQ6IN85 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PPP4R3AQ6IN85 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
PPP4R3AQ6IN85 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.23■□□□□ 0.83
PPP4R3AQ6IN85 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
PPP4R3AQ6IN85 DDX43P3-201ENST00000441064 443 ntBASIC20.23■□□□□ 0.83
PPP4R3AQ6IN85 HCG4P8-203ENST00000443049 980 ntBASIC20.23■□□□□ 0.83
PPP4R3AQ6IN85 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PPP4R3AQ6IN85 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.23■□□□□ 0.83
PPP4R3AQ6IN85 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
PPP4R3AQ6IN85 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.23■□□□□ 0.83
PPP4R3AQ6IN85 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PPP4R3AQ6IN85 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PPP4R3AQ6IN85 NOC2LP2-201ENST00000407594 1944 ntBASIC20.23■□□□□ 0.83
PPP4R3AQ6IN85 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.23■□□□□ 0.83
PPP4R3AQ6IN85 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PPP4R3AQ6IN85 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PPP4R3AQ6IN85 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
PPP4R3AQ6IN85 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.22■□□□□ 0.83
PPP4R3AQ6IN85 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PPP4R3AQ6IN85 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
PPP4R3AQ6IN85 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
PPP4R3AQ6IN85 AC006116.8-202ENST00000587620 1550 ntBASIC20.22■□□□□ 0.83
PPP4R3AQ6IN85 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PPP4R3AQ6IN85 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PPP4R3AQ6IN85 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PPP4R3AQ6IN85 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PPP4R3AQ6IN85 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PPP4R3AQ6IN85 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms