Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
RNF220Q5VTB9 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF220Q5VTB9 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF220Q5VTB9 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF220Q5VTB9 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF220Q5VTB9 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF220Q5VTB9 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF220Q5VTB9 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF220Q5VTB9 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.21■□□□□ 0.35
RNF220Q5VTB9 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.21■□□□□ 0.35
RNF220Q5VTB9 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
RNF220Q5VTB9 AGGF1P2-201ENST00000426656 2106 ntBASIC17.21■□□□□ 0.35
RNF220Q5VTB9 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RNF220Q5VTB9 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.21■□□□□ 0.35
RNF220Q5VTB9 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.21■□□□□ 0.35
RNF220Q5VTB9 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RNF220Q5VTB9 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RNF220Q5VTB9 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF220Q5VTB9 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF220Q5VTB9 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.21■□□□□ 0.35
RNF220Q5VTB9 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.21■□□□□ 0.35
RNF220Q5VTB9 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF220Q5VTB9 MFAP1P1-201ENST00000442257 1255 ntBASIC17.21■□□□□ 0.35
RNF220Q5VTB9 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.21■□□□□ 0.35
RNF220Q5VTB9 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.21■□□□□ 0.35
RNF220Q5VTB9 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.21■□□□□ 0.35
RNF220Q5VTB9 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RNF220Q5VTB9 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF220Q5VTB9 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
RNF220Q5VTB9 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF220Q5VTB9 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.21■□□□□ 0.35
RNF220Q5VTB9 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RNF220Q5VTB9 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.21■□□□□ 0.35
RNF220Q5VTB9 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF220Q5VTB9 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
RNF220Q5VTB9 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RNF220Q5VTB9 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RNF220Q5VTB9 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.21■□□□□ 0.34
RNF220Q5VTB9 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.21■□□□□ 0.34
RNF220Q5VTB9 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.21■□□□□ 0.34
RNF220Q5VTB9 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
RNF220Q5VTB9 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
RNF220Q5VTB9 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RNF220Q5VTB9 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
RNF220Q5VTB9 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RNF220Q5VTB9 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RNF220Q5VTB9 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF220Q5VTB9 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF220Q5VTB9 AC106886.4-201ENST00000623557 2502 ntBASIC17.2■□□□□ 0.34
RNF220Q5VTB9 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
RNF220Q5VTB9 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF220Q5VTB9 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF220Q5VTB9 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RNF220Q5VTB9 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.2■□□□□ 0.34
RNF220Q5VTB9 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF220Q5VTB9 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.2■□□□□ 0.34
RNF220Q5VTB9 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF220Q5VTB9 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF220Q5VTB9 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RNF220Q5VTB9 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RNF220Q5VTB9 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF220Q5VTB9 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
RNF220Q5VTB9 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF220Q5VTB9 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF220Q5VTB9 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.2■□□□□ 0.34
RNF220Q5VTB9 CA15P1-201ENST00000481698 905 ntBASIC17.2■□□□□ 0.34
RNF220Q5VTB9 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF220Q5VTB9 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
RNF220Q5VTB9 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.2■□□□□ 0.34
RNF220Q5VTB9 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.2■□□□□ 0.34
RNF220Q5VTB9 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RNF220Q5VTB9 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.2■□□□□ 0.34
RNF220Q5VTB9 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RNF220Q5VTB9 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
RNF220Q5VTB9 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.2■□□□□ 0.34
RNF220Q5VTB9 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RNF220Q5VTB9 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RNF220Q5VTB9 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
RNF220Q5VTB9 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF220Q5VTB9 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
RNF220Q5VTB9 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.19■□□□□ 0.34
RNF220Q5VTB9 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF220Q5VTB9 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.19■□□□□ 0.34
RNF220Q5VTB9 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF220Q5VTB9 AL499627.1-201ENST00000569373 2188 ntBASIC17.19■□□□□ 0.34
RNF220Q5VTB9 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF220Q5VTB9 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
RNF220Q5VTB9 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF220Q5VTB9 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF220Q5VTB9 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF220Q5VTB9 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF220Q5VTB9 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF220Q5VTB9 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF220Q5VTB9 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.19■□□□□ 0.34
RNF220Q5VTB9 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RNF220Q5VTB9 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.19■□□□□ 0.34
RNF220Q5VTB9 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.19■□□□□ 0.34
RNF220Q5VTB9 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF220Q5VTB9 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.19■□□□□ 0.34
RNF220Q5VTB9 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms