Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RBM48Q5RL73 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.28■□□□□ 0.2
RBM48Q5RL73 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.28■□□□□ 0.2
RBM48Q5RL73 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RBM48Q5RL73 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RBM48Q5RL73 AC008741.2-201ENST00000612792 3115 ntBASIC16.28■□□□□ 0.2
RBM48Q5RL73 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.28■□□□□ 0.2
RBM48Q5RL73 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RBM48Q5RL73 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RBM48Q5RL73 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RBM48Q5RL73 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.28■□□□□ 0.2
RBM48Q5RL73 AC022188.1-201ENST00000620960 1664 ntBASIC16.27■□□□□ 0.2
RBM48Q5RL73 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.27■□□□□ 0.2
RBM48Q5RL73 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.27■□□□□ 0.2
RBM48Q5RL73 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RBM48Q5RL73 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RBM48Q5RL73 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.2
RBM48Q5RL73 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
RBM48Q5RL73 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RBM48Q5RL73 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RBM48Q5RL73 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
RBM48Q5RL73 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
RBM48Q5RL73 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RBM48Q5RL73 SLC29A4P1-201ENST00000398760 971 ntBASIC16.27■□□□□ 0.2
RBM48Q5RL73 AL023284.2-201ENST00000405850 579 ntBASIC16.27■□□□□ 0.2
RBM48Q5RL73 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.27■□□□□ 0.2
RBM48Q5RL73 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC16.27■□□□□ 0.2
RBM48Q5RL73 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC16.27■□□□□ 0.2
RBM48Q5RL73 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.27■□□□□ 0.2
RBM48Q5RL73 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
RBM48Q5RL73 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RBM48Q5RL73 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.27■□□□□ 0.2
RBM48Q5RL73 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.27■□□□□ 0.2
RBM48Q5RL73 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RBM48Q5RL73 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RBM48Q5RL73 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RBM48Q5RL73 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RBM48Q5RL73 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.27■□□□□ 0.19
RBM48Q5RL73 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
RBM48Q5RL73 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RBM48Q5RL73 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
RBM48Q5RL73 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.27■□□□□ 0.19
RBM48Q5RL73 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
RBM48Q5RL73 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RBM48Q5RL73 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
RBM48Q5RL73 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.27■□□□□ 0.19
RBM48Q5RL73 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RBM48Q5RL73 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RBM48Q5RL73 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RBM48Q5RL73 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RBM48Q5RL73 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
RBM48Q5RL73 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
RBM48Q5RL73 AC006449.5-201ENST00000610658 2098 ntBASIC16.26■□□□□ 0.19
RBM48Q5RL73 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
RBM48Q5RL73 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBM48Q5RL73 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBM48Q5RL73 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
RBM48Q5RL73 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RBM48Q5RL73 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBM48Q5RL73 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBM48Q5RL73 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
RBM48Q5RL73 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBM48Q5RL73 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.26■□□□□ 0.19
RBM48Q5RL73 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBM48Q5RL73 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBM48Q5RL73 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RBM48Q5RL73 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBM48Q5RL73 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBM48Q5RL73 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.26■□□□□ 0.19
RBM48Q5RL73 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
RBM48Q5RL73 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
RBM48Q5RL73 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.26■□□□□ 0.19
RBM48Q5RL73 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBM48Q5RL73 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.26■□□□□ 0.19
RBM48Q5RL73 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RBM48Q5RL73 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RBM48Q5RL73 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RBM48Q5RL73 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBM48Q5RL73 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RBM48Q5RL73 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.26■□□□□ 0.19
RBM48Q5RL73 AC083906.2-201ENST00000511578 360 ntBASIC16.26■□□□□ 0.19
RBM48Q5RL73 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.26■□□□□ 0.19
RBM48Q5RL73 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RBM48Q5RL73 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.26■□□□□ 0.19
RBM48Q5RL73 AC008622.2-201ENST00000617006 1229 ntBASIC16.26■□□□□ 0.19
RBM48Q5RL73 CYP2T1P-202ENST00000641596 2535 ntBASIC16.26■□□□□ 0.19
RBM48Q5RL73 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBM48Q5RL73 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBM48Q5RL73 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBM48Q5RL73 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.26■□□□□ 0.19
RBM48Q5RL73 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBM48Q5RL73 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RBM48Q5RL73 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
RBM48Q5RL73 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBM48Q5RL73 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBM48Q5RL73 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBM48Q5RL73 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.26■□□□□ 0.19
RBM48Q5RL73 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.26■□□□□ 0.19
RBM48Q5RL73 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBM48Q5RL73 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms