Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNFT1Q5M7Z0 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNFT1Q5M7Z0 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.99■□□□□ 0.15
RNFT1Q5M7Z0 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.99■□□□□ 0.15
RNFT1Q5M7Z0 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RNFT1Q5M7Z0 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.99■□□□□ 0.15
RNFT1Q5M7Z0 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNFT1Q5M7Z0 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RNFT1Q5M7Z0 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
RNFT1Q5M7Z0 KRT18P13-201ENST00000400056 1290 ntBASIC15.99■□□□□ 0.15
RNFT1Q5M7Z0 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.99■□□□□ 0.15
RNFT1Q5M7Z0 LAGE3P1-201ENST00000425356 484 ntBASIC15.99■□□□□ 0.15
RNFT1Q5M7Z0 AC103564.2-201ENST00000432853 1299 ntBASIC15.99■□□□□ 0.15
RNFT1Q5M7Z0 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.99■□□□□ 0.15
RNFT1Q5M7Z0 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.99■□□□□ 0.15
RNFT1Q5M7Z0 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
RNFT1Q5M7Z0 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.99■□□□□ 0.15
RNFT1Q5M7Z0 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.99■□□□□ 0.15
RNFT1Q5M7Z0 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.99■□□□□ 0.15
RNFT1Q5M7Z0 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.99■□□□□ 0.15
RNFT1Q5M7Z0 REXO1L9P-201ENST00000604264 2108 ntBASIC15.99■□□□□ 0.15
RNFT1Q5M7Z0 Z83851.2-201ENST00000609564 659 ntBASIC15.99■□□□□ 0.15
RNFT1Q5M7Z0 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.99■□□□□ 0.15
RNFT1Q5M7Z0 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNFT1Q5M7Z0 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.99■□□□□ 0.15
RNFT1Q5M7Z0 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNFT1Q5M7Z0 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC15.99■□□□□ 0.15
RNFT1Q5M7Z0 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RNFT1Q5M7Z0 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNFT1Q5M7Z0 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNFT1Q5M7Z0 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNFT1Q5M7Z0 AL138781.2-201ENST00000617896 1843 ntBASIC15.98■□□□□ 0.15
RNFT1Q5M7Z0 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNFT1Q5M7Z0 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNFT1Q5M7Z0 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNFT1Q5M7Z0 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC15.98■□□□□ 0.15
RNFT1Q5M7Z0 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.98■□□□□ 0.15
RNFT1Q5M7Z0 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC15.98■□□□□ 0.15
RNFT1Q5M7Z0 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNFT1Q5M7Z0 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNFT1Q5M7Z0 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNFT1Q5M7Z0 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNFT1Q5M7Z0 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNFT1Q5M7Z0 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
RNFT1Q5M7Z0 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.98■□□□□ 0.15
RNFT1Q5M7Z0 PGAM5P1-201ENST00000518923 814 ntBASIC15.98■□□□□ 0.15
RNFT1Q5M7Z0 UNC93B6-202ENST00000528242 690 ntBASIC15.98■□□□□ 0.15
RNFT1Q5M7Z0 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.98■□□□□ 0.15
RNFT1Q5M7Z0 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNFT1Q5M7Z0 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
RNFT1Q5M7Z0 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.98■□□□□ 0.15
RNFT1Q5M7Z0 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.98■□□□□ 0.15
RNFT1Q5M7Z0 SIGLEC16-201ENST00000599858 1437 ntBASIC15.98■□□□□ 0.15
RNFT1Q5M7Z0 AC140113.2-201ENST00000604370 208 ntBASIC15.98■□□□□ 0.15
RNFT1Q5M7Z0 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.98■□□□□ 0.15
RNFT1Q5M7Z0 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.98■□□□□ 0.15
RNFT1Q5M7Z0 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNFT1Q5M7Z0 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RNFT1Q5M7Z0 AC132938.5-201ENST00000624980 1813 ntBASIC15.98■□□□□ 0.15
RNFT1Q5M7Z0 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
RNFT1Q5M7Z0 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNFT1Q5M7Z0 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RNFT1Q5M7Z0 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNFT1Q5M7Z0 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RNFT1Q5M7Z0 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RNFT1Q5M7Z0 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNFT1Q5M7Z0 AC004408.2-201ENST00000623613 2777 ntBASIC15.98■□□□□ 0.15
RNFT1Q5M7Z0 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNFT1Q5M7Z0 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RNFT1Q5M7Z0 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNFT1Q5M7Z0 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNFT1Q5M7Z0 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.97■□□□□ 0.15
RNFT1Q5M7Z0 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
RNFT1Q5M7Z0 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
RNFT1Q5M7Z0 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNFT1Q5M7Z0 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.97■□□□□ 0.15
RNFT1Q5M7Z0 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNFT1Q5M7Z0 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNFT1Q5M7Z0 AC009949.1-201ENST00000623048 1830 ntBASIC15.97■□□□□ 0.15
RNFT1Q5M7Z0 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNFT1Q5M7Z0 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNFT1Q5M7Z0 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNFT1Q5M7Z0 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNFT1Q5M7Z0 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNFT1Q5M7Z0 PRYP5-201ENST00000451909 266 ntBASIC15.97■□□□□ 0.15
RNFT1Q5M7Z0 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNFT1Q5M7Z0 AC092865.5-201ENST00000545435 363 ntBASIC15.97■□□□□ 0.15
RNFT1Q5M7Z0 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNFT1Q5M7Z0 AL356488.2-201ENST00000602755 427 ntBASIC15.97■□□□□ 0.15
RNFT1Q5M7Z0 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.97■□□□□ 0.15
RNFT1Q5M7Z0 AC027601.4-201ENST00000611259 610 ntBASIC15.97■□□□□ 0.15
RNFT1Q5M7Z0 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.97■□□□□ 0.15
RNFT1Q5M7Z0 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNFT1Q5M7Z0 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNFT1Q5M7Z0 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
RNFT1Q5M7Z0 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNFT1Q5M7Z0 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC15.97■□□□□ 0.15
RNFT1Q5M7Z0 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.97■□□□□ 0.15
RNFT1Q5M7Z0 AP000997.3-201ENST00000623333 2250 ntBASIC15.97■□□□□ 0.15
RNFT1Q5M7Z0 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms