Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 AC008894.3-201ENST00000624324 3103 ntBASIC18.06■□□□□ 0.48
KHDC1Q4VXA5 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
KHDC1Q4VXA5 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.06■□□□□ 0.48
KHDC1Q4VXA5 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
KHDC1Q4VXA5 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KHDC1Q4VXA5 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
KHDC1Q4VXA5 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.06■□□□□ 0.48
KHDC1Q4VXA5 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.06■□□□□ 0.48
KHDC1Q4VXA5 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
KHDC1Q4VXA5 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
KHDC1Q4VXA5 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.06■□□□□ 0.48
KHDC1Q4VXA5 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.06■□□□□ 0.48
KHDC1Q4VXA5 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.06■□□□□ 0.48
KHDC1Q4VXA5 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.06■□□□□ 0.48
KHDC1Q4VXA5 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
KHDC1Q4VXA5 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.06■□□□□ 0.48
KHDC1Q4VXA5 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
KHDC1Q4VXA5 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
KHDC1Q4VXA5 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KHDC1Q4VXA5 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.06■□□□□ 0.48
KHDC1Q4VXA5 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.06■□□□□ 0.48
KHDC1Q4VXA5 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
KHDC1Q4VXA5 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
KHDC1Q4VXA5 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
KHDC1Q4VXA5 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
KHDC1Q4VXA5 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KHDC1Q4VXA5 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KHDC1Q4VXA5 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KHDC1Q4VXA5 AC138028.4-201ENST00000564984 1845 ntBASIC18.05■□□□□ 0.48
KHDC1Q4VXA5 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.05■□□□□ 0.48
KHDC1Q4VXA5 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
KHDC1Q4VXA5 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KHDC1Q4VXA5 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
KHDC1Q4VXA5 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
KHDC1Q4VXA5 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KHDC1Q4VXA5 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
KHDC1Q4VXA5 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
KHDC1Q4VXA5 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
KHDC1Q4VXA5 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
KHDC1Q4VXA5 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KHDC1Q4VXA5 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KHDC1Q4VXA5 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KHDC1Q4VXA5 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.05■□□□□ 0.48
KHDC1Q4VXA5 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
KHDC1Q4VXA5 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KHDC1Q4VXA5 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.05■□□□□ 0.48
KHDC1Q4VXA5 AC024563.2-201ENST00000603282 481 ntBASIC18.05■□□□□ 0.48
KHDC1Q4VXA5 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KHDC1Q4VXA5 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KHDC1Q4VXA5 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.05■□□□□ 0.48
KHDC1Q4VXA5 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.05■□□□□ 0.48
KHDC1Q4VXA5 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KHDC1Q4VXA5 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KHDC1Q4VXA5 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KHDC1Q4VXA5 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.05■□□□□ 0.48
KHDC1Q4VXA5 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.05■□□□□ 0.48
KHDC1Q4VXA5 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
KHDC1Q4VXA5 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
KHDC1Q4VXA5 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.05■□□□□ 0.48
KHDC1Q4VXA5 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
KHDC1Q4VXA5 PP12613-201ENST00000424958 2230 ntBASIC18.04■□□□□ 0.48
KHDC1Q4VXA5 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.04■□□□□ 0.48
KHDC1Q4VXA5 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
KHDC1Q4VXA5 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
KHDC1Q4VXA5 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
KHDC1Q4VXA5 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KHDC1Q4VXA5 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
KHDC1Q4VXA5 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KHDC1Q4VXA5 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.04■□□□□ 0.48
KHDC1Q4VXA5 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KHDC1Q4VXA5 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
KHDC1Q4VXA5 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.04■□□□□ 0.48
KHDC1Q4VXA5 AC011676.5-201ENST00000624864 2660 ntBASIC18.04■□□□□ 0.48
KHDC1Q4VXA5 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KHDC1Q4VXA5 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.04■□□□□ 0.48
KHDC1Q4VXA5 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
KHDC1Q4VXA5 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KHDC1Q4VXA5 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
KHDC1Q4VXA5 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.04■□□□□ 0.48
KHDC1Q4VXA5 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.04■□□□□ 0.48
KHDC1Q4VXA5 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.04■□□□□ 0.48
KHDC1Q4VXA5 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
KHDC1Q4VXA5 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.04■□□□□ 0.48
KHDC1Q4VXA5 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
KHDC1Q4VXA5 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
KHDC1Q4VXA5 NKILA-202ENST00000614771 2598 ntBASIC18.04■□□□□ 0.48
KHDC1Q4VXA5 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
KHDC1Q4VXA5 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
KHDC1Q4VXA5 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KHDC1Q4VXA5 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KHDC1Q4VXA5 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
KHDC1Q4VXA5 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
KHDC1Q4VXA5 IER3-202ENST00000376377 1350 ntBASIC18.04■□□□□ 0.48
KHDC1Q4VXA5 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
KHDC1Q4VXA5 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KHDC1Q4VXA5 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.03■□□□□ 0.48
KHDC1Q4VXA5 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KHDC1Q4VXA5 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
KHDC1Q4VXA5 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.03■□□□□ 0.48
KHDC1Q4VXA5 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms