Protein–RNA interactions for Protein: Q4G0I0

CCSMST1, Protein CCSMST1, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSMST1Q4G0I0 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCSMST1Q4G0I0 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CCSMST1Q4G0I0 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCSMST1Q4G0I0 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCSMST1Q4G0I0 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCSMST1Q4G0I0 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.3■□□□□ 0.36
CCSMST1Q4G0I0 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CCSMST1Q4G0I0 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CCSMST1Q4G0I0 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.3■□□□□ 0.36
CCSMST1Q4G0I0 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.3■□□□□ 0.36
CCSMST1Q4G0I0 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CCSMST1Q4G0I0 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCSMST1Q4G0I0 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCSMST1Q4G0I0 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.3■□□□□ 0.36
CCSMST1Q4G0I0 IGHV3-47-201ENST00000425060 335 ntBASIC17.3■□□□□ 0.36
CCSMST1Q4G0I0 AC246785.2-201ENST00000432512 513 ntBASIC17.3■□□□□ 0.36
CCSMST1Q4G0I0 KRT17P6-201ENST00000453795 1220 ntBASIC17.3■□□□□ 0.36
CCSMST1Q4G0I0 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.3■□□□□ 0.36
CCSMST1Q4G0I0 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.3■□□□□ 0.36
CCSMST1Q4G0I0 AC074051.2-201ENST00000565115 352 ntBASIC17.3■□□□□ 0.36
CCSMST1Q4G0I0 GNAS-203ENST00000306120 1878 ntBASIC17.3■□□□□ 0.36
CCSMST1Q4G0I0 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CCSMST1Q4G0I0 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.3■□□□□ 0.36
CCSMST1Q4G0I0 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.3■□□□□ 0.36
CCSMST1Q4G0I0 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.3■□□□□ 0.36
CCSMST1Q4G0I0 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCSMST1Q4G0I0 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCSMST1Q4G0I0 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCSMST1Q4G0I0 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCSMST1Q4G0I0 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCSMST1Q4G0I0 REXO1L11P-201ENST00000620964 1927 ntBASIC17.29■□□□□ 0.36
CCSMST1Q4G0I0 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCSMST1Q4G0I0 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCSMST1Q4G0I0 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.29■□□□□ 0.36
CCSMST1Q4G0I0 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.29■□□□□ 0.36
CCSMST1Q4G0I0 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCSMST1Q4G0I0 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.29■□□□□ 0.36
CCSMST1Q4G0I0 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.29■□□□□ 0.36
CCSMST1Q4G0I0 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.29■□□□□ 0.36
CCSMST1Q4G0I0 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCSMST1Q4G0I0 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CCSMST1Q4G0I0 AC096633.1-201ENST00000422446 749 ntBASIC17.29■□□□□ 0.36
CCSMST1Q4G0I0 HCG4P8-203ENST00000443049 980 ntBASIC17.29■□□□□ 0.36
CCSMST1Q4G0I0 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.29■□□□□ 0.36
CCSMST1Q4G0I0 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.29■□□□□ 0.36
CCSMST1Q4G0I0 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.29■□□□□ 0.36
CCSMST1Q4G0I0 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.29■□□□□ 0.36
CCSMST1Q4G0I0 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.29■□□□□ 0.36
CCSMST1Q4G0I0 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCSMST1Q4G0I0 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.29■□□□□ 0.36
CCSMST1Q4G0I0 NSUN5P1-202ENST00000421140 1535 ntBASIC17.29■□□□□ 0.36
CCSMST1Q4G0I0 NSUN5P2-203ENST00000457352 1529 ntBASIC17.29■□□□□ 0.36
CCSMST1Q4G0I0 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CCSMST1Q4G0I0 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
CCSMST1Q4G0I0 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCSMST1Q4G0I0 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCSMST1Q4G0I0 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CCSMST1Q4G0I0 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.29■□□□□ 0.36
CCSMST1Q4G0I0 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCSMST1Q4G0I0 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCSMST1Q4G0I0 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCSMST1Q4G0I0 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CCSMST1Q4G0I0 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CCSMST1Q4G0I0 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.29■□□□□ 0.36
CCSMST1Q4G0I0 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCSMST1Q4G0I0 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.29■□□□□ 0.36
CCSMST1Q4G0I0 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
CCSMST1Q4G0I0 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCSMST1Q4G0I0 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCSMST1Q4G0I0 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.28■□□□□ 0.36
CCSMST1Q4G0I0 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCSMST1Q4G0I0 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CCSMST1Q4G0I0 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCSMST1Q4G0I0 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.28■□□□□ 0.36
CCSMST1Q4G0I0 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCSMST1Q4G0I0 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCSMST1Q4G0I0 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCSMST1Q4G0I0 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CCSMST1Q4G0I0 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.28■□□□□ 0.36
CCSMST1Q4G0I0 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
CCSMST1Q4G0I0 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CCSMST1Q4G0I0 AC007967.3-201ENST00000434308 558 ntBASIC17.28■□□□□ 0.36
CCSMST1Q4G0I0 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.28■□□□□ 0.36
CCSMST1Q4G0I0 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.28■□□□□ 0.36
CCSMST1Q4G0I0 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCSMST1Q4G0I0 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.28■□□□□ 0.36
CCSMST1Q4G0I0 Z69720.1-201ENST00000601483 472 ntBASIC17.28■□□□□ 0.36
CCSMST1Q4G0I0 AC116407.2-201ENST00000613639 860 ntBASIC17.28■□□□□ 0.36
CCSMST1Q4G0I0 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CCSMST1Q4G0I0 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCSMST1Q4G0I0 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
CCSMST1Q4G0I0 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.28■□□□□ 0.36
CCSMST1Q4G0I0 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCSMST1Q4G0I0 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCSMST1Q4G0I0 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
CCSMST1Q4G0I0 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCSMST1Q4G0I0 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.27■□□□□ 0.36
CCSMST1Q4G0I0 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CCSMST1Q4G0I0 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCSMST1Q4G0I0 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 174.8 ms