Protein–RNA interactions for Protein: Q05940

SLC18A2, Synaptic vesicular amine transporter, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC18A2Q05940 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SLC18A2Q05940 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SLC18A2Q05940 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC18A2Q05940 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.68■□□□□ 0.42
SLC18A2Q05940 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC18A2Q05940 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC18A2Q05940 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC18A2Q05940 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC18A2Q05940 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC18A2Q05940 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SLC18A2Q05940 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC18A2Q05940 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SLC18A2Q05940 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.68■□□□□ 0.42
SLC18A2Q05940 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.67■□□□□ 0.42
SLC18A2Q05940 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC18A2Q05940 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC18A2Q05940 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC18A2Q05940 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.67■□□□□ 0.42
SLC18A2Q05940 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC18A2Q05940 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SLC18A2Q05940 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.67■□□□□ 0.42
SLC18A2Q05940 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC18A2Q05940 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SLC18A2Q05940 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.67■□□□□ 0.42
SLC18A2Q05940 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC18A2Q05940 LYSMD4-203ENST00000378904 2122 ntBASIC17.67■□□□□ 0.42
SLC18A2Q05940 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC18A2Q05940 KRT18P65-201ENST00000439811 1286 ntBASIC17.67■□□□□ 0.42
SLC18A2Q05940 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC18A2Q05940 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC18A2Q05940 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.67■□□□□ 0.42
SLC18A2Q05940 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
SLC18A2Q05940 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC18A2Q05940 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.67■□□□□ 0.42
SLC18A2Q05940 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.67■□□□□ 0.42
SLC18A2Q05940 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SLC18A2Q05940 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC18A2Q05940 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SLC18A2Q05940 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC18A2Q05940 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC18A2Q05940 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC18A2Q05940 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC18A2Q05940 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC18A2Q05940 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC18A2Q05940 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC18A2Q05940 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC18A2Q05940 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC18A2Q05940 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC18A2Q05940 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC18A2Q05940 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC18A2Q05940 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC18A2Q05940 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC18A2Q05940 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC18A2Q05940 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
SLC18A2Q05940 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC18A2Q05940 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC18A2Q05940 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC18A2Q05940 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC18A2Q05940 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC18A2Q05940 AC005104.2-201ENST00000427818 678 ntBASIC17.66■□□□□ 0.42
SLC18A2Q05940 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.66■□□□□ 0.42
SLC18A2Q05940 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.66■□□□□ 0.42
SLC18A2Q05940 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.66■□□□□ 0.42
SLC18A2Q05940 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.66■□□□□ 0.42
SLC18A2Q05940 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC18A2Q05940 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC18A2Q05940 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.66■□□□□ 0.42
SLC18A2Q05940 AC116353.5-201ENST00000638148 1699 ntBASIC17.66■□□□□ 0.42
SLC18A2Q05940 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC18A2Q05940 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC18A2Q05940 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC18A2Q05940 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC18A2Q05940 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC18A2Q05940 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC18A2Q05940 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SLC18A2Q05940 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SLC18A2Q05940 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC18A2Q05940 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC18A2Q05940 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC18A2Q05940 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC18A2Q05940 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC18A2Q05940 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC18A2Q05940 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
SLC18A2Q05940 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SLC18A2Q05940 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC18A2Q05940 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SLC18A2Q05940 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC18A2Q05940 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
SLC18A2Q05940 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SLC18A2Q05940 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.65■□□□□ 0.42
SLC18A2Q05940 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC18A2Q05940 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC18A2Q05940 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.65■□□□□ 0.42
SLC18A2Q05940 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SLC18A2Q05940 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC18A2Q05940 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.65■□□□□ 0.42
SLC18A2Q05940 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC18A2Q05940 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.65■□□□□ 0.42
SLC18A2Q05940 TSPY14P-201ENST00000303979 915 ntBASIC17.65■□□□□ 0.42
SLC18A2Q05940 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms