Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.5■□□□□ 0.39
CDK3Q00526 AC103564.2-201ENST00000432853 1299 ntBASIC17.5■□□□□ 0.39
CDK3Q00526 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.5■□□□□ 0.39
CDK3Q00526 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CDK3Q00526 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDK3Q00526 AP000867.4-201ENST00000641616 219 ntBASIC17.5■□□□□ 0.39
CDK3Q00526 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDK3Q00526 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CDK3Q00526 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDK3Q00526 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDK3Q00526 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDK3Q00526 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.5■□□□□ 0.39
CDK3Q00526 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDK3Q00526 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.5■□□□□ 0.39
CDK3Q00526 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDK3Q00526 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDK3Q00526 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDK3Q00526 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDK3Q00526 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.49■□□□□ 0.39
CDK3Q00526 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDK3Q00526 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.49■□□□□ 0.39
CDK3Q00526 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.49■□□□□ 0.39
CDK3Q00526 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.49■□□□□ 0.39
CDK3Q00526 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.49■□□□□ 0.39
CDK3Q00526 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDK3Q00526 BX276092.7-203ENST00000637198 1536 ntBASIC17.49■□□□□ 0.39
CDK3Q00526 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.49■□□□□ 0.39
CDK3Q00526 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CDK3Q00526 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.49■□□□□ 0.39
CDK3Q00526 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDK3Q00526 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.49■□□□□ 0.39
CDK3Q00526 MRPL3P1-201ENST00000400109 1033 ntBASIC17.49■□□□□ 0.39
CDK3Q00526 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDK3Q00526 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.49■□□□□ 0.39
CDK3Q00526 FAM197Y8-203ENST00000450145 560 ntBASIC17.49■□□□□ 0.39
CDK3Q00526 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CDK3Q00526 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CDK3Q00526 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.49■□□□□ 0.39
CDK3Q00526 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDK3Q00526 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CDK3Q00526 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
CDK3Q00526 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.49■□□□□ 0.39
CDK3Q00526 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.49■□□□□ 0.39
CDK3Q00526 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.49■□□□□ 0.39
CDK3Q00526 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDK3Q00526 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDK3Q00526 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.49■□□□□ 0.39
CDK3Q00526 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDK3Q00526 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDK3Q00526 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDK3Q00526 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDK3Q00526 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CDK3Q00526 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDK3Q00526 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDK3Q00526 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.48■□□□□ 0.39
CDK3Q00526 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDK3Q00526 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.48■□□□□ 0.39
CDK3Q00526 SIRPAP1-201ENST00000448467 1770 ntBASIC17.48■□□□□ 0.39
CDK3Q00526 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.48■□□□□ 0.39
CDK3Q00526 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
CDK3Q00526 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDK3Q00526 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.48■□□□□ 0.39
CDK3Q00526 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDK3Q00526 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDK3Q00526 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDK3Q00526 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CDK3Q00526 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.48■□□□□ 0.39
CDK3Q00526 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.48■□□□□ 0.39
CDK3Q00526 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.48■□□□□ 0.39
CDK3Q00526 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.48■□□□□ 0.39
CDK3Q00526 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDK3Q00526 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.48■□□□□ 0.39
CDK3Q00526 SCARNA2-201ENST00000458748 420 ntBASIC17.48■□□□□ 0.39
CDK3Q00526 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
CDK3Q00526 AL662844.1-201ENST00000546340 181 ntBASIC17.48■□□□□ 0.39
CDK3Q00526 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.48■□□□□ 0.39
CDK3Q00526 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDK3Q00526 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.48■□□□□ 0.39
CDK3Q00526 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDK3Q00526 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.48■□□□□ 0.39
CDK3Q00526 AD001527.2-201ENST00000622994 785 ntBASIC17.48■□□□□ 0.39
CDK3Q00526 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CDK3Q00526 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CDK3Q00526 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.48■□□□□ 0.39
CDK3Q00526 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CDK3Q00526 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.48■□□□□ 0.39
CDK3Q00526 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDK3Q00526 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.48■□□□□ 0.39
CDK3Q00526 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.48■□□□□ 0.39
CDK3Q00526 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
CDK3Q00526 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.48■□□□□ 0.39
CDK3Q00526 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDK3Q00526 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.47■□□□□ 0.39
CDK3Q00526 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDK3Q00526 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CDK3Q00526 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDK3Q00526 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDK3Q00526 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDK3Q00526 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
CDK3Q00526 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms