Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
RHBDL3P58872 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
RHBDL3P58872 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
RHBDL3P58872 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
RHBDL3P58872 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RHBDL3P58872 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.97■□□□□ 0.95
RHBDL3P58872 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RHBDL3P58872 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.97■□□□□ 0.95
RHBDL3P58872 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RHBDL3P58872 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC20.97■□□□□ 0.95
RHBDL3P58872 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC20.97■□□□□ 0.95
RHBDL3P58872 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RHBDL3P58872 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.97■□□□□ 0.95
RHBDL3P58872 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC20.97■□□□□ 0.95
RHBDL3P58872 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.97■□□□□ 0.95
RHBDL3P58872 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC20.97■□□□□ 0.95
RHBDL3P58872 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RHBDL3P58872 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
RHBDL3P58872 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.97■□□□□ 0.95
RHBDL3P58872 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
RHBDL3P58872 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RHBDL3P58872 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC20.97■□□□□ 0.95
RHBDL3P58872 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RHBDL3P58872 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RHBDL3P58872 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RHBDL3P58872 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC20.97■□□□□ 0.95
RHBDL3P58872 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
RHBDL3P58872 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC20.97■□□□□ 0.95
RHBDL3P58872 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RHBDL3P58872 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.97■□□□□ 0.95
RHBDL3P58872 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.97■□□□□ 0.95
RHBDL3P58872 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC20.97■□□□□ 0.95
RHBDL3P58872 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RHBDL3P58872 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.96■□□□□ 0.95
RHBDL3P58872 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RHBDL3P58872 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.96■□□□□ 0.95
RHBDL3P58872 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RHBDL3P58872 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
RHBDL3P58872 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RHBDL3P58872 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RHBDL3P58872 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
RHBDL3P58872 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.96■□□□□ 0.95
RHBDL3P58872 FLJ13224-201ENST00000313737 1514 ntBASIC20.96■□□□□ 0.95
RHBDL3P58872 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.96■□□□□ 0.95
RHBDL3P58872 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.96■□□□□ 0.95
RHBDL3P58872 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20.96■□□□□ 0.95
RHBDL3P58872 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.96■□□□□ 0.95
RHBDL3P58872 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.96■□□□□ 0.95
RHBDL3P58872 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
RHBDL3P58872 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC20.96■□□□□ 0.95
RHBDL3P58872 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RHBDL3P58872 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.96■□□□□ 0.95
RHBDL3P58872 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RHBDL3P58872 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
RHBDL3P58872 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RHBDL3P58872 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.95■□□□□ 0.94
RHBDL3P58872 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
RHBDL3P58872 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
RHBDL3P58872 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RHBDL3P58872 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RHBDL3P58872 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
RHBDL3P58872 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RHBDL3P58872 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
RHBDL3P58872 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RHBDL3P58872 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RHBDL3P58872 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RHBDL3P58872 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.95■□□□□ 0.94
RHBDL3P58872 AC007967.2-201ENST00000432613 625 ntBASIC20.95■□□□□ 0.94
RHBDL3P58872 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
RHBDL3P58872 SIGLEC30P-201ENST00000455569 941 ntBASIC20.95■□□□□ 0.94
RHBDL3P58872 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC20.95■□□□□ 0.94
RHBDL3P58872 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC20.95■□□□□ 0.94
RHBDL3P58872 MIR1199-201ENST00000621445 119 ntBASIC20.95■□□□□ 0.94
RHBDL3P58872 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC20.95■□□□□ 0.94
RHBDL3P58872 AC005593.1-201ENST00000624894 515 ntBASIC20.95■□□□□ 0.94
RHBDL3P58872 PGM5P2-202ENST00000637225 1043 ntBASIC20.95■□□□□ 0.94
RHBDL3P58872 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
RHBDL3P58872 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RHBDL3P58872 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.95■□□□□ 0.94
RHBDL3P58872 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RHBDL3P58872 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RHBDL3P58872 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RHBDL3P58872 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RHBDL3P58872 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RHBDL3P58872 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RHBDL3P58872 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RHBDL3P58872 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
RHBDL3P58872 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
RHBDL3P58872 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
RHBDL3P58872 CRCP-205ENST00000431089 942 ntTSL 2 BASIC20.94■□□□□ 0.94
RHBDL3P58872 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC20.94■□□□□ 0.94
RHBDL3P58872 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
RHBDL3P58872 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.94■□□□□ 0.94
RHBDL3P58872 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC20.94■□□□□ 0.94
RHBDL3P58872 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC20.94■□□□□ 0.94
RHBDL3P58872 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.94■□□□□ 0.94
RHBDL3P58872 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC20.94■□□□□ 0.94
RHBDL3P58872 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC20.94■□□□□ 0.94
RHBDL3P58872 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RHBDL3P58872 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms