Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
CLDN2P57739 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.55■□□□□ 0.4
CLDN2P57739 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN2P57739 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.55■□□□□ 0.4
CLDN2P57739 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
CLDN2P57739 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN2P57739 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.55■□□□□ 0.4
CLDN2P57739 PMPCAP1-201ENST00000508114 1576 ntBASIC17.55■□□□□ 0.4
CLDN2P57739 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN2P57739 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CLDN2P57739 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CLDN2P57739 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.55■□□□□ 0.4
CLDN2P57739 AC122714.2-201ENST00000502787 707 ntBASIC17.55■□□□□ 0.4
CLDN2P57739 POLD2P1-201ENST00000511220 997 ntBASIC17.55■□□□□ 0.4
CLDN2P57739 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.55■□□□□ 0.4
CLDN2P57739 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN2P57739 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN2P57739 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CLDN2P57739 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN2P57739 AC104581.1-202ENST00000635932 2618 ntBASIC17.55■□□□□ 0.4
CLDN2P57739 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN2P57739 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.55■□□□□ 0.4
CLDN2P57739 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.55■□□□□ 0.4
CLDN2P57739 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN2P57739 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.55■□□□□ 0.4
CLDN2P57739 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN2P57739 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.55■□□□□ 0.4
CLDN2P57739 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CLDN2P57739 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.54■□□□□ 0.4
CLDN2P57739 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CLDN2P57739 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN2P57739 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN2P57739 HLA-J-201ENST00000462773 1622 ntBASIC17.54■□□□□ 0.4
CLDN2P57739 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
CLDN2P57739 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.54■□□□□ 0.4
CLDN2P57739 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN2P57739 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN2P57739 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN2P57739 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN2P57739 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN2P57739 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN2P57739 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CLDN2P57739 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN2P57739 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN2P57739 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN2P57739 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.54■□□□□ 0.4
CLDN2P57739 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.54■□□□□ 0.4
CLDN2P57739 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.54■□□□□ 0.4
CLDN2P57739 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.54■□□□□ 0.4
CLDN2P57739 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN2P57739 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN2P57739 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN2P57739 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN2P57739 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN2P57739 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CLDN2P57739 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.54■□□□□ 0.4
CLDN2P57739 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN2P57739 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.54■□□□□ 0.4
CLDN2P57739 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN2P57739 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN2P57739 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN2P57739 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN2P57739 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN2P57739 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN2P57739 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN2P57739 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.53■□□□□ 0.4
CLDN2P57739 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN2P57739 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CLDN2P57739 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.53■□□□□ 0.4
CLDN2P57739 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN2P57739 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN2P57739 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN2P57739 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN2P57739 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN2P57739 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN2P57739 COX5BP2-201ENST00000392354 334 ntBASIC17.53■□□□□ 0.4
CLDN2P57739 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.53■□□□□ 0.4
CLDN2P57739 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.53■□□□□ 0.4
CLDN2P57739 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.53■□□□□ 0.4
CLDN2P57739 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.53■□□□□ 0.4
CLDN2P57739 KRT18P58-201ENST00000527480 1120 ntBASIC17.53■□□□□ 0.4
CLDN2P57739 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.53■□□□□ 0.4
CLDN2P57739 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.53■□□□□ 0.4
CLDN2P57739 AD001527.2-201ENST00000622994 785 ntBASIC17.53■□□□□ 0.4
CLDN2P57739 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CLDN2P57739 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN2P57739 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CLDN2P57739 AL138781.2-201ENST00000617896 1843 ntBASIC17.53■□□□□ 0.4
CLDN2P57739 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN2P57739 AC079776.2-201ENST00000641154 1609 ntBASIC17.53■□□□□ 0.4
CLDN2P57739 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.53■□□□□ 0.4
CLDN2P57739 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN2P57739 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN2P57739 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN2P57739 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN2P57739 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CLDN2P57739 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CLDN2P57739 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
CLDN2P57739 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.52■□□□□ 0.4
CLDN2P57739 NEFHP1-201ENST00000412845 2629 ntBASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms