Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 AC008894.3-201ENST00000624324 3103 ntBASIC14.31□□□□□ -0.12
PAX9P55771 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PAX9P55771 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PAX9P55771 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.31□□□□□ -0.12
PAX9P55771 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PAX9P55771 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PAX9P55771 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PAX9P55771 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PAX9P55771 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
PAX9P55771 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PAX9P55771 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PAX9P55771 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PAX9P55771 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC14.31□□□□□ -0.12
PAX9P55771 AC128676.1-201ENST00000454392 318 ntBASIC14.31□□□□□ -0.12
PAX9P55771 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC14.31□□□□□ -0.12
PAX9P55771 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC14.31□□□□□ -0.12
PAX9P55771 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC14.31□□□□□ -0.12
PAX9P55771 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC14.31□□□□□ -0.12
PAX9P55771 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC14.31□□□□□ -0.12
PAX9P55771 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PAX9P55771 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC14.31□□□□□ -0.12
PAX9P55771 WWOX-216ENST00000569818 525 ntBASIC14.31□□□□□ -0.12
PAX9P55771 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
PAX9P55771 DGCR10-201ENST00000609839 495 ntBASIC14.31□□□□□ -0.12
PAX9P55771 CR769767.2-201ENST00000622735 460 ntBASIC14.31□□□□□ -0.12
PAX9P55771 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PAX9P55771 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.31□□□□□ -0.12
PAX9P55771 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.31□□□□□ -0.12
PAX9P55771 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PAX9P55771 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PAX9P55771 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PAX9P55771 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PAX9P55771 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PAX9P55771 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PAX9P55771 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
PAX9P55771 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC14.3□□□□□ -0.12
PAX9P55771 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PAX9P55771 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
PAX9P55771 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC14.3□□□□□ -0.12
PAX9P55771 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
PAX9P55771 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
PAX9P55771 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PAX9P55771 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PAX9P55771 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC14.3□□□□□ -0.12
PAX9P55771 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC14.3□□□□□ -0.12
PAX9P55771 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC14.3□□□□□ -0.12
PAX9P55771 DENND3-207ENST00000518347 850 ntTSL 2 BASIC14.3□□□□□ -0.12
PAX9P55771 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC14.3□□□□□ -0.12
PAX9P55771 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC14.3□□□□□ -0.12
PAX9P55771 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
PAX9P55771 IRX5-204ENST00000560154 879 ntTSL 5 BASIC14.3□□□□□ -0.12
PAX9P55771 MIR4651-201ENST00000582622 73 ntBASIC14.3□□□□□ -0.12
PAX9P55771 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
PAX9P55771 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PAX9P55771 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PAX9P55771 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
PAX9P55771 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PAX9P55771 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
PAX9P55771 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PAX9P55771 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC14.3□□□□□ -0.12
PAX9P55771 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PAX9P55771 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC14.3□□□□□ -0.12
PAX9P55771 AC016396.2-201ENST00000562575 1417 ntBASIC14.3□□□□□ -0.12
PAX9P55771 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
PAX9P55771 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PAX9P55771 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC14.3□□□□□ -0.12
PAX9P55771 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
PAX9P55771 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PAX9P55771 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PAX9P55771 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
PAX9P55771 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
PAX9P55771 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PAX9P55771 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PAX9P55771 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
PAX9P55771 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.3□□□□□ -0.12
PAX9P55771 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PAX9P55771 AC116353.5-201ENST00000638148 1699 ntBASIC14.3□□□□□ -0.12
PAX9P55771 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.3□□□□□ -0.12
PAX9P55771 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
PAX9P55771 AL162727.3-201ENST00000635661 2787 ntBASIC14.29□□□□□ -0.12
PAX9P55771 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PAX9P55771 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
PAX9P55771 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
PAX9P55771 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PAX9P55771 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PAX9P55771 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PAX9P55771 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PAX9P55771 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
PAX9P55771 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PAX9P55771 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PAX9P55771 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PAX9P55771 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PAX9P55771 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC14.29□□□□□ -0.12
PAX9P55771 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PAX9P55771 FAM197Y1-201ENST00000421178 764 ntBASIC14.29□□□□□ -0.12
PAX9P55771 AC116562.2-201ENST00000507042 360 ntBASIC14.29□□□□□ -0.12
PAX9P55771 AC097488.1-201ENST00000507834 756 ntBASIC14.29□□□□□ -0.12
PAX9P55771 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC14.29□□□□□ -0.12
PAX9P55771 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC14.29□□□□□ -0.12
PAX9P55771 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms