Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 Z83836.1-201ENST00000624605 1642 ntBASIC17.61■□□□□ 0.41
CDKN2DP55273 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDKN2DP55273 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDKN2DP55273 AC020916.1-201ENST00000587762 1774 ntBASIC17.61■□□□□ 0.41
CDKN2DP55273 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDKN2DP55273 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDKN2DP55273 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.61■□□□□ 0.41
CDKN2DP55273 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
CDKN2DP55273 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDKN2DP55273 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDKN2DP55273 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDKN2DP55273 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CDKN2DP55273 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CDKN2DP55273 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDKN2DP55273 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.6■□□□□ 0.41
CDKN2DP55273 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDKN2DP55273 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDKN2DP55273 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDKN2DP55273 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDKN2DP55273 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDKN2DP55273 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDKN2DP55273 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDKN2DP55273 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CDKN2DP55273 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDKN2DP55273 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.6■□□□□ 0.41
CDKN2DP55273 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.6■□□□□ 0.41
CDKN2DP55273 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDKN2DP55273 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDKN2DP55273 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.6■□□□□ 0.41
CDKN2DP55273 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.6■□□□□ 0.41
CDKN2DP55273 AL138688.1-201ENST00000624851 1594 ntBASIC17.6■□□□□ 0.41
CDKN2DP55273 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDKN2DP55273 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CDKN2DP55273 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.6■□□□□ 0.41
CDKN2DP55273 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDKN2DP55273 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.6■□□□□ 0.41
CDKN2DP55273 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.6■□□□□ 0.41
CDKN2DP55273 AC138932.1-201ENST00000534164 6830 ntBASIC17.6■□□□□ 0.41
CDKN2DP55273 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDKN2DP55273 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDKN2DP55273 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CDKN2DP55273 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CDKN2DP55273 CROCCP2-202ENST00000412962 2773 ntBASIC17.59■□□□□ 0.41
CDKN2DP55273 AC080080.1-201ENST00000625121 2420 ntBASIC17.59■□□□□ 0.41
CDKN2DP55273 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDKN2DP55273 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CDKN2DP55273 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.59■□□□□ 0.41
CDKN2DP55273 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.59■□□□□ 0.41
CDKN2DP55273 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDKN2DP55273 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.59■□□□□ 0.41
CDKN2DP55273 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.59■□□□□ 0.41
CDKN2DP55273 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDKN2DP55273 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDKN2DP55273 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDKN2DP55273 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.59■□□□□ 0.41
CDKN2DP55273 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDKN2DP55273 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.59■□□□□ 0.41
CDKN2DP55273 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.59■□□□□ 0.41
CDKN2DP55273 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDKN2DP55273 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.59■□□□□ 0.41
CDKN2DP55273 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.59■□□□□ 0.41
CDKN2DP55273 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.59■□□□□ 0.41
CDKN2DP55273 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.59■□□□□ 0.41
CDKN2DP55273 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.59■□□□□ 0.41
CDKN2DP55273 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDKN2DP55273 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CDKN2DP55273 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDKN2DP55273 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDKN2DP55273 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDKN2DP55273 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.59■□□□□ 0.41
CDKN2DP55273 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CDKN2DP55273 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDKN2DP55273 HTR7P1-202ENST00000624664 4411 ntBASIC17.58■□□□□ 0.41
CDKN2DP55273 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDKN2DP55273 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CDKN2DP55273 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.58■□□□□ 0.41
CDKN2DP55273 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
CDKN2DP55273 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDKN2DP55273 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDKN2DP55273 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.58■□□□□ 0.41
CDKN2DP55273 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDKN2DP55273 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDKN2DP55273 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CDKN2DP55273 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDKN2DP55273 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDKN2DP55273 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDKN2DP55273 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.58■□□□□ 0.4
CDKN2DP55273 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDKN2DP55273 TMPOP1-202ENST00000424642 1267 ntBASIC17.58■□□□□ 0.4
CDKN2DP55273 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.58■□□□□ 0.4
CDKN2DP55273 AL671277.2-201ENST00000458060 996 ntBASIC17.58■□□□□ 0.4
CDKN2DP55273 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDKN2DP55273 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.58■□□□□ 0.4
CDKN2DP55273 LINC01451-201ENST00000623792 534 ntBASIC17.58■□□□□ 0.4
CDKN2DP55273 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDKN2DP55273 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDKN2DP55273 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDKN2DP55273 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDKN2DP55273 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDKN2DP55273 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms