Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.62■□□□□ 0.25
PSMD4P55036 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.62■□□□□ 0.25
PSMD4P55036 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.62■□□□□ 0.25
PSMD4P55036 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.62■□□□□ 0.25
PSMD4P55036 GUSBP12-201ENST00000513727 720 ntBASIC16.62■□□□□ 0.25
PSMD4P55036 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.62■□□□□ 0.25
PSMD4P55036 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.62■□□□□ 0.25
PSMD4P55036 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.62■□□□□ 0.25
PSMD4P55036 AL390719.2-201ENST00000606993 987 ntBASIC16.62■□□□□ 0.25
PSMD4P55036 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PSMD4P55036 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.62■□□□□ 0.25
PSMD4P55036 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PSMD4P55036 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.62■□□□□ 0.25
PSMD4P55036 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.62■□□□□ 0.25
PSMD4P55036 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PSMD4P55036 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PSMD4P55036 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PSMD4P55036 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PSMD4P55036 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PSMD4P55036 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PSMD4P55036 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PSMD4P55036 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
PSMD4P55036 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
PSMD4P55036 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PSMD4P55036 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PSMD4P55036 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
PSMD4P55036 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PSMD4P55036 LTB4R2-202ENST00000528054 3092 ntBASIC16.61■□□□□ 0.25
PSMD4P55036 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PSMD4P55036 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PSMD4P55036 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PSMD4P55036 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PSMD4P55036 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.61■□□□□ 0.25
PSMD4P55036 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.61■□□□□ 0.25
PSMD4P55036 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PSMD4P55036 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PSMD4P55036 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PSMD4P55036 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PSMD4P55036 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PSMD4P55036 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PSMD4P55036 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
PSMD4P55036 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.61■□□□□ 0.25
PSMD4P55036 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PSMD4P55036 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.61■□□□□ 0.25
PSMD4P55036 SPDYE13P-201ENST00000445314 798 ntBASIC16.61■□□□□ 0.25
PSMD4P55036 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PSMD4P55036 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.61■□□□□ 0.25
PSMD4P55036 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.61■□□□□ 0.25
PSMD4P55036 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.61■□□□□ 0.25
PSMD4P55036 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.61■□□□□ 0.25
PSMD4P55036 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.61■□□□□ 0.25
PSMD4P55036 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.61■□□□□ 0.25
PSMD4P55036 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PSMD4P55036 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PSMD4P55036 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PSMD4P55036 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.61■□□□□ 0.25
PSMD4P55036 AC068880.1-201ENST00000507289 2297 ntBASIC16.61■□□□□ 0.25
PSMD4P55036 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PSMD4P55036 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PSMD4P55036 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PSMD4P55036 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PSMD4P55036 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PSMD4P55036 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PSMD4P55036 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PSMD4P55036 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PSMD4P55036 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.6■□□□□ 0.25
PSMD4P55036 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PSMD4P55036 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PSMD4P55036 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PSMD4P55036 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PSMD4P55036 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.6■□□□□ 0.25
PSMD4P55036 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.6■□□□□ 0.25
PSMD4P55036 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PSMD4P55036 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PSMD4P55036 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.6■□□□□ 0.25
PSMD4P55036 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.6■□□□□ 0.25
PSMD4P55036 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.6■□□□□ 0.25
PSMD4P55036 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PSMD4P55036 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.6■□□□□ 0.25
PSMD4P55036 AC011498.5-201ENST00000592027 486 ntBASIC16.6■□□□□ 0.25
PSMD4P55036 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.6■□□□□ 0.25
PSMD4P55036 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.6■□□□□ 0.25
PSMD4P55036 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.6■□□□□ 0.25
PSMD4P55036 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
PSMD4P55036 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PSMD4P55036 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.6■□□□□ 0.25
PSMD4P55036 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PSMD4P55036 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PSMD4P55036 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PSMD4P55036 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PSMD4P55036 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.6■□□□□ 0.25
PSMD4P55036 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PSMD4P55036 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PSMD4P55036 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PSMD4P55036 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PSMD4P55036 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PSMD4P55036 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PSMD4P55036 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PSMD4P55036 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PSMD4P55036 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms