Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 RNA5SP415-201ENST00000517246 115 ntBASIC18.56■□□□□ 0.56
EPHB3P54753 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
EPHB3P54753 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
EPHB3P54753 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.56■□□□□ 0.56
EPHB3P54753 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
EPHB3P54753 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
EPHB3P54753 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.56■□□□□ 0.56
EPHB3P54753 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
EPHB3P54753 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
EPHB3P54753 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
EPHB3P54753 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.56■□□□□ 0.56
EPHB3P54753 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
EPHB3P54753 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
EPHB3P54753 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.56■□□□□ 0.56
EPHB3P54753 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
EPHB3P54753 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
EPHB3P54753 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
EPHB3P54753 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
EPHB3P54753 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
EPHB3P54753 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
EPHB3P54753 AP002414.3-201ENST00000589352 1468 ntBASIC18.55■□□□□ 0.56
EPHB3P54753 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
EPHB3P54753 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
EPHB3P54753 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
EPHB3P54753 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
EPHB3P54753 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.55■□□□□ 0.56
EPHB3P54753 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.55■□□□□ 0.56
EPHB3P54753 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.55■□□□□ 0.56
EPHB3P54753 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.55■□□□□ 0.56
EPHB3P54753 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
EPHB3P54753 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
EPHB3P54753 Z83851.2-201ENST00000609564 659 ntBASIC18.55■□□□□ 0.56
EPHB3P54753 AC027601.4-201ENST00000611259 610 ntBASIC18.55■□□□□ 0.56
EPHB3P54753 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
EPHB3P54753 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
EPHB3P54753 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
EPHB3P54753 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
EPHB3P54753 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.55■□□□□ 0.56
EPHB3P54753 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
EPHB3P54753 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
EPHB3P54753 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
EPHB3P54753 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
EPHB3P54753 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
EPHB3P54753 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
EPHB3P54753 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
EPHB3P54753 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
EPHB3P54753 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.54■□□□□ 0.56
EPHB3P54753 AC093503.3-201ENST00000624917 2352 ntBASIC18.54■□□□□ 0.56
EPHB3P54753 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
EPHB3P54753 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.54■□□□□ 0.56
EPHB3P54753 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
EPHB3P54753 AC098818.2-201ENST00000564925 2320 ntBASIC18.54■□□□□ 0.56
EPHB3P54753 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
EPHB3P54753 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.54■□□□□ 0.56
EPHB3P54753 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
EPHB3P54753 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.54■□□□□ 0.56
EPHB3P54753 AL020989.1-201ENST00000422979 469 ntBASIC18.54■□□□□ 0.56
EPHB3P54753 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.54■□□□□ 0.56
EPHB3P54753 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.54■□□□□ 0.56
EPHB3P54753 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.54■□□□□ 0.56
EPHB3P54753 AC006557.2-201ENST00000592985 1240 ntBASIC18.54■□□□□ 0.56
EPHB3P54753 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.54■□□□□ 0.56
EPHB3P54753 AC004817.3-201ENST00000602957 2129 ntBASIC18.54■□□□□ 0.56
EPHB3P54753 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.54■□□□□ 0.56
EPHB3P54753 MIR1199-201ENST00000621445 119 ntBASIC18.54■□□□□ 0.56
EPHB3P54753 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
EPHB3P54753 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.54■□□□□ 0.56
EPHB3P54753 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
EPHB3P54753 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.54■□□□□ 0.56
EPHB3P54753 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
EPHB3P54753 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.54■□□□□ 0.56
EPHB3P54753 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
EPHB3P54753 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.54■□□□□ 0.56
EPHB3P54753 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
EPHB3P54753 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.54■□□□□ 0.56
EPHB3P54753 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
EPHB3P54753 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
EPHB3P54753 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
EPHB3P54753 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
EPHB3P54753 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
EPHB3P54753 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
EPHB3P54753 AL353593.2-201ENST00000602529 1483 ntBASIC18.53■□□□□ 0.56
EPHB3P54753 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
EPHB3P54753 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.53■□□□□ 0.56
EPHB3P54753 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.53■□□□□ 0.56
EPHB3P54753 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
EPHB3P54753 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
EPHB3P54753 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
EPHB3P54753 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.53■□□□□ 0.56
EPHB3P54753 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.53■□□□□ 0.56
EPHB3P54753 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
EPHB3P54753 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
EPHB3P54753 AL591424.1-201ENST00000442569 1213 ntBASIC18.53■□□□□ 0.56
EPHB3P54753 AC092865.5-201ENST00000545435 363 ntBASIC18.53■□□□□ 0.56
EPHB3P54753 AC034105.1-201ENST00000563488 319 ntBASIC18.53■□□□□ 0.56
EPHB3P54753 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.53■□□□□ 0.56
EPHB3P54753 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
EPHB3P54753 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
EPHB3P54753 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
EPHB3P54753 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms