Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CDR1P51861 AC139713.2-201ENST00000641328 2723 ntBASIC19.51■□□□□ 0.71
CDR1P51861 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDR1P51861 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDR1P51861 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDR1P51861 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CDR1P51861 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CDR1P51861 AP002414.4-201ENST00000589764 1148 ntBASIC19.51■□□□□ 0.71
CDR1P51861 AC005332.3-201ENST00000589904 676 ntBASIC19.51■□□□□ 0.71
CDR1P51861 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDR1P51861 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDR1P51861 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CDR1P51861 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.51■□□□□ 0.71
CDR1P51861 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CDR1P51861 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CDR1P51861 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.51■□□□□ 0.71
CDR1P51861 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CDR1P51861 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDR1P51861 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDR1P51861 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
CDR1P51861 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CDR1P51861 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDR1P51861 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDR1P51861 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.51■□□□□ 0.71
CDR1P51861 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDR1P51861 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDR1P51861 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
CDR1P51861 KRT8P7-201ENST00000533003 1432 ntBASIC19.51■□□□□ 0.71
CDR1P51861 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CDR1P51861 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CDR1P51861 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDR1P51861 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDR1P51861 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.5■□□□□ 0.71
CDR1P51861 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.5■□□□□ 0.71
CDR1P51861 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CDR1P51861 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDR1P51861 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.5■□□□□ 0.71
CDR1P51861 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.5■□□□□ 0.71
CDR1P51861 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDR1P51861 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDR1P51861 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDR1P51861 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDR1P51861 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDR1P51861 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CDR1P51861 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CDR1P51861 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.5■□□□□ 0.71
CDR1P51861 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.5■□□□□ 0.71
CDR1P51861 AP003733.1-201ENST00000491725 852 ntBASIC19.5■□□□□ 0.71
CDR1P51861 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.5■□□□□ 0.71
CDR1P51861 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDR1P51861 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.5■□□□□ 0.71
CDR1P51861 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CDR1P51861 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDR1P51861 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.5■□□□□ 0.71
CDR1P51861 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.5■□□□□ 0.71
CDR1P51861 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDR1P51861 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDR1P51861 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDR1P51861 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
CDR1P51861 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CDR1P51861 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDR1P51861 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDR1P51861 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDR1P51861 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDR1P51861 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CDR1P51861 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC19.49■□□□□ 0.71
CDR1P51861 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDR1P51861 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDR1P51861 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDR1P51861 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.49■□□□□ 0.71
CDR1P51861 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.49■□□□□ 0.71
CDR1P51861 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDR1P51861 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDR1P51861 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDR1P51861 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.49■□□□□ 0.71
CDR1P51861 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.49■□□□□ 0.71
CDR1P51861 KRT18P48-201ENST00000434763 852 ntBASIC19.49■□□□□ 0.71
CDR1P51861 PVRIG2P-201ENST00000435460 978 ntBASIC19.49■□□□□ 0.71
CDR1P51861 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.49■□□□□ 0.71
CDR1P51861 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.49■□□□□ 0.71
CDR1P51861 MIR3180-1-201ENST00000580374 94 ntBASIC19.49■□□□□ 0.71
CDR1P51861 MIR3180-3-201ENST00000584616 94 ntBASIC19.49■□□□□ 0.71
CDR1P51861 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CDR1P51861 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.49■□□□□ 0.71
CDR1P51861 AC092329.2-201ENST00000598402 547 ntBASIC19.49■□□□□ 0.71
CDR1P51861 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.49■□□□□ 0.71
CDR1P51861 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CDR1P51861 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDR1P51861 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDR1P51861 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDR1P51861 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.49■□□□□ 0.71
CDR1P51861 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CDR1P51861 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDR1P51861 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDR1P51861 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDR1P51861 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDR1P51861 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.49■□□□□ 0.71
CDR1P51861 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.48■□□□□ 0.71
CDR1P51861 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CDR1P51861 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms