Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
GPC3P51654 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GPC3P51654 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.66■□□□□ 0.74
GPC3P51654 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GPC3P51654 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GPC3P51654 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.66■□□□□ 0.74
GPC3P51654 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GPC3P51654 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GPC3P51654 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.66■□□□□ 0.74
GPC3P51654 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GPC3P51654 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GPC3P51654 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
GPC3P51654 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GPC3P51654 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GPC3P51654 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
GPC3P51654 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
GPC3P51654 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GPC3P51654 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GPC3P51654 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GPC3P51654 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GPC3P51654 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GPC3P51654 ABCD1P5-201ENST00000445663 754 ntBASIC19.65■□□□□ 0.74
GPC3P51654 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.65■□□□□ 0.74
GPC3P51654 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.65■□□□□ 0.74
GPC3P51654 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
GPC3P51654 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.65■□□□□ 0.74
GPC3P51654 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.65■□□□□ 0.74
GPC3P51654 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GPC3P51654 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.65■□□□□ 0.74
GPC3P51654 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
GPC3P51654 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.65■□□□□ 0.74
GPC3P51654 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.65■□□□□ 0.74
GPC3P51654 AP005117.1-201ENST00000584346 1413 ntBASIC19.65■□□□□ 0.74
GPC3P51654 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GPC3P51654 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GPC3P51654 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
GPC3P51654 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.65■□□□□ 0.74
GPC3P51654 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GPC3P51654 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GPC3P51654 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
GPC3P51654 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
GPC3P51654 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.64■□□□□ 0.74
GPC3P51654 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.64■□□□□ 0.74
GPC3P51654 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GPC3P51654 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
GPC3P51654 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
GPC3P51654 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GPC3P51654 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
GPC3P51654 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.64■□□□□ 0.73
GPC3P51654 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.64■□□□□ 0.73
GPC3P51654 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.64■□□□□ 0.73
GPC3P51654 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
GPC3P51654 AC096633.1-201ENST00000422446 749 ntBASIC19.64■□□□□ 0.73
GPC3P51654 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
GPC3P51654 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.64■□□□□ 0.73
GPC3P51654 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.64■□□□□ 0.73
GPC3P51654 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.64■□□□□ 0.73
GPC3P51654 AL773604.1-201ENST00000617417 272 ntBASIC19.64■□□□□ 0.73
GPC3P51654 AC148477.8-201ENST00000624298 468 ntBASIC19.64■□□□□ 0.73
GPC3P51654 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.64■□□□□ 0.73
GPC3P51654 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
GPC3P51654 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.64■□□□□ 0.73
GPC3P51654 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.64■□□□□ 0.73
GPC3P51654 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
GPC3P51654 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
GPC3P51654 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GPC3P51654 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.64■□□□□ 0.73
GPC3P51654 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
GPC3P51654 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GPC3P51654 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
GPC3P51654 AC138028.4-201ENST00000564984 1845 ntBASIC19.64■□□□□ 0.73
GPC3P51654 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.64■□□□□ 0.73
GPC3P51654 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GPC3P51654 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
GPC3P51654 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GPC3P51654 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
GPC3P51654 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GPC3P51654 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GPC3P51654 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.63■□□□□ 0.73
GPC3P51654 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
GPC3P51654 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
GPC3P51654 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GPC3P51654 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GPC3P51654 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GPC3P51654 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.63■□□□□ 0.73
GPC3P51654 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
GPC3P51654 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GPC3P51654 FAM220CP-201ENST00000395253 831 ntBASIC19.63■□□□□ 0.73
GPC3P51654 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
GPC3P51654 AC018712.1-201ENST00000455767 687 ntBASIC19.63■□□□□ 0.73
GPC3P51654 AF186996.4-201ENST00000467186 377 ntBASIC19.63■□□□□ 0.73
GPC3P51654 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.63■□□□□ 0.73
GPC3P51654 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
GPC3P51654 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.63■□□□□ 0.73
GPC3P51654 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.63■□□□□ 0.73
GPC3P51654 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.63■□□□□ 0.73
GPC3P51654 AP001005.1-201ENST00000571755 1248 ntBASIC19.63■□□□□ 0.73
GPC3P51654 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.63■□□□□ 0.73
GPC3P51654 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.63■□□□□ 0.73
GPC3P51654 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms