Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC31.37■■■□□ 2.61
SMARCA2P51531 VPS29-207ENST00000549970 818 ntTSL 3 BASIC31.37■■■□□ 2.61
SMARCA2P51531 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
SMARCA2P51531 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
SMARCA2P51531 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
SMARCA2P51531 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC31.36■■■□□ 2.61
SMARCA2P51531 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
SMARCA2P51531 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC31.36■■■□□ 2.61
SMARCA2P51531 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
SMARCA2P51531 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC31.36■■■□□ 2.61
SMARCA2P51531 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC31.36■■■□□ 2.61
SMARCA2P51531 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC31.36■■■□□ 2.61
SMARCA2P51531 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC31.36■■■□□ 2.61
SMARCA2P51531 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC31.36■■■□□ 2.61
SMARCA2P51531 TMED1-207ENST00000591695 809 ntTSL 5 BASIC31.36■■■□□ 2.61
SMARCA2P51531 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC31.36■■■□□ 2.61
SMARCA2P51531 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
SMARCA2P51531 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC31.36■■■□□ 2.61
SMARCA2P51531 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC31.36■■■□□ 2.61
SMARCA2P51531 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC31.36■■■□□ 2.61
SMARCA2P51531 AC097637.2-201ENST00000624096 1997 ntBASIC31.36■■■□□ 2.61
SMARCA2P51531 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
SMARCA2P51531 GSAP-205ENST00000430584 600 ntTSL 5 BASIC31.35■■■□□ 2.61
SMARCA2P51531 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC31.35■■■□□ 2.61
SMARCA2P51531 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
SMARCA2P51531 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC31.35■■■□□ 2.61
SMARCA2P51531 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC31.35■■■□□ 2.61
SMARCA2P51531 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC31.35■■■□□ 2.61
SMARCA2P51531 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC31.35■■■□□ 2.61
SMARCA2P51531 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC31.35■■■□□ 2.61
SMARCA2P51531 PC-208ENST00000529047 1607 ntTSL 3 BASIC31.35■■■□□ 2.61
SMARCA2P51531 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
SMARCA2P51531 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
SMARCA2P51531 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC31.34■■■□□ 2.61
SMARCA2P51531 TIMM8BP1-201ENST00000452384 211 ntBASIC31.34■■■□□ 2.61
SMARCA2P51531 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
SMARCA2P51531 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC31.34■■■□□ 2.61
SMARCA2P51531 AP001059.3-201ENST00000619053 235 ntBASIC31.34■■■□□ 2.61
SMARCA2P51531 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC31.34■■■□□ 2.61
SMARCA2P51531 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC31.34■■■□□ 2.61
SMARCA2P51531 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC31.34■■■□□ 2.61
SMARCA2P51531 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC31.34■■■□□ 2.61
SMARCA2P51531 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
SMARCA2P51531 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC31.34■■■□□ 2.61
SMARCA2P51531 FAM207CP-201ENST00000443486 507 ntBASIC31.34■■■□□ 2.61
SMARCA2P51531 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC31.34■■■□□ 2.61
SMARCA2P51531 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
SMARCA2P51531 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
SMARCA2P51531 AC063926.2-201ENST00000623766 1308 ntBASIC31.33■■■□□ 2.61
SMARCA2P51531 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC31.33■■■□□ 2.61
SMARCA2P51531 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC31.33■■■□□ 2.61
SMARCA2P51531 GAPDHP21-201ENST00000450301 1010 ntBASIC31.33■■■□□ 2.61
SMARCA2P51531 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
SMARCA2P51531 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC31.33■■■□□ 2.61
SMARCA2P51531 RPL28-209ENST00000560055 670 ntTSL 3 BASIC31.33■■■□□ 2.61
SMARCA2P51531 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
SMARCA2P51531 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC31.33■■■□□ 2.61
SMARCA2P51531 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
SMARCA2P51531 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC31.33■■■□□ 2.61
SMARCA2P51531 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC31.32■■■□□ 2.61
SMARCA2P51531 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.61
SMARCA2P51531 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
SMARCA2P51531 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC31.32■■■□□ 2.6
SMARCA2P51531 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
SMARCA2P51531 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
SMARCA2P51531 AL590787.1-201ENST00000568856 1315 ntBASIC31.32■■■□□ 2.6
SMARCA2P51531 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
SMARCA2P51531 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
SMARCA2P51531 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC31.32■■■□□ 2.6
SMARCA2P51531 TERF1P3-201ENST00000505638 1227 ntBASIC31.32■■■□□ 2.6
SMARCA2P51531 KRT8P48-201ENST00000515599 1220 ntBASIC31.32■■■□□ 2.6
SMARCA2P51531 RN7SL204P-201ENST00000582831 262 ntBASIC31.32■■■□□ 2.6
SMARCA2P51531 AC026120.1-201ENST00000611536 926 ntBASIC31.32■■■□□ 2.6
SMARCA2P51531 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
SMARCA2P51531 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
SMARCA2P51531 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC31.31■■■□□ 2.6
SMARCA2P51531 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
SMARCA2P51531 GPS2P2-201ENST00000430745 888 ntBASIC31.31■■■□□ 2.6
SMARCA2P51531 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
SMARCA2P51531 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC31.31■■■□□ 2.6
SMARCA2P51531 AL512356.2-201ENST00000546955 174 ntBASIC31.31■■■□□ 2.6
SMARCA2P51531 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC31.31■■■□□ 2.6
SMARCA2P51531 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC31.31■■■□□ 2.6
SMARCA2P51531 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC31.31■■■□□ 2.6
SMARCA2P51531 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC31.31■■■□□ 2.6
SMARCA2P51531 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC31.31■■■□□ 2.6
SMARCA2P51531 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
SMARCA2P51531 PHGDH-209ENST00000641074 1780 ntBASIC31.31■■■□□ 2.6
SMARCA2P51531 CYP51A1P2-201ENST00000419457 1499 ntBASIC31.31■■■□□ 2.6
SMARCA2P51531 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
SMARCA2P51531 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
SMARCA2P51531 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC31.31■■■□□ 2.6
SMARCA2P51531 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
SMARCA2P51531 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
SMARCA2P51531 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC31.3■■■□□ 2.6
SMARCA2P51531 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
SMARCA2P51531 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC31.3■■■□□ 2.6
SMARCA2P51531 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
SMARCA2P51531 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC31.3■■■□□ 2.6
SMARCA2P51531 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC31.3■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms