Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC6A12P48065 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC6A12P48065 IGHV3-41-201ENST00000613121 348 ntBASIC17.18■□□□□ 0.34
SLC6A12P48065 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC6A12P48065 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC6A12P48065 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC6A12P48065 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC6A12P48065 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC6A12P48065 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC6A12P48065 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC6A12P48065 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SLC6A12P48065 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC6A12P48065 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC6A12P48065 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC6A12P48065 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC6A12P48065 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC6A12P48065 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.18■□□□□ 0.34
SLC6A12P48065 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SLC6A12P48065 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC6A12P48065 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.17■□□□□ 0.34
SLC6A12P48065 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.17■□□□□ 0.34
SLC6A12P48065 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.17■□□□□ 0.34
SLC6A12P48065 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC6A12P48065 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC6A12P48065 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.17■□□□□ 0.34
SLC6A12P48065 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC6A12P48065 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC6A12P48065 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC6A12P48065 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
SLC6A12P48065 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC6A12P48065 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.17■□□□□ 0.34
SLC6A12P48065 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.17■□□□□ 0.34
SLC6A12P48065 AC125634.1-201ENST00000438758 1403 ntBASIC17.17■□□□□ 0.34
SLC6A12P48065 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SLC6A12P48065 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC6A12P48065 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SLC6A12P48065 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.17■□□□□ 0.34
SLC6A12P48065 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SLC6A12P48065 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.17■□□□□ 0.34
SLC6A12P48065 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
SLC6A12P48065 AC005336.2-201ENST00000593183 939 ntBASIC17.17■□□□□ 0.34
SLC6A12P48065 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC6A12P48065 AC141586.5-201ENST00000624546 2050 ntBASIC17.17■□□□□ 0.34
SLC6A12P48065 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC6A12P48065 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.17■□□□□ 0.34
SLC6A12P48065 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SLC6A12P48065 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.17■□□□□ 0.34
SLC6A12P48065 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC6A12P48065 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC6A12P48065 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC6A12P48065 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC6A12P48065 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SLC6A12P48065 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC6A12P48065 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
SLC6A12P48065 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC6A12P48065 AC016734.2-201ENST00000624325 1377 ntBASIC17.16■□□□□ 0.34
SLC6A12P48065 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC6A12P48065 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC6A12P48065 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
SLC6A12P48065 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC6A12P48065 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
SLC6A12P48065 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
SLC6A12P48065 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SLC6A12P48065 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC6A12P48065 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC6A12P48065 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC6A12P48065 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
SLC6A12P48065 COX5BP2-201ENST00000392354 334 ntBASIC17.16■□□□□ 0.34
SLC6A12P48065 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC6A12P48065 CHCHD2P8-201ENST00000429873 447 ntBASIC17.16■□□□□ 0.34
SLC6A12P48065 BX276092.5-203ENST00000456199 560 ntBASIC17.16■□□□□ 0.34
SLC6A12P48065 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.16■□□□□ 0.34
SLC6A12P48065 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC6A12P48065 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.16■□□□□ 0.34
SLC6A12P48065 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.16■□□□□ 0.34
SLC6A12P48065 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.16■□□□□ 0.34
SLC6A12P48065 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.16■□□□□ 0.34
SLC6A12P48065 AL138831.2-201ENST00000606564 490 ntBASIC17.16■□□□□ 0.34
SLC6A12P48065 AL121672.3-201ENST00000608644 468 ntBASIC17.16■□□□□ 0.34
SLC6A12P48065 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC6A12P48065 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC6A12P48065 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC6A12P48065 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC6A12P48065 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SLC6A12P48065 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC6A12P48065 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC6A12P48065 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC6A12P48065 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC6A12P48065 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC6A12P48065 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC6A12P48065 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC6A12P48065 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC6A12P48065 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SLC6A12P48065 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC6A12P48065 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.15■□□□□ 0.34
SLC6A12P48065 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SLC6A12P48065 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC6A12P48065 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SLC6A12P48065 PCED1CP-201ENST00000419887 785 ntBASIC17.15■□□□□ 0.34
SLC6A12P48065 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms