Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
GRIK1P39086 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
GRIK1P39086 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.77■□□□□ 0.59
GRIK1P39086 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
GRIK1P39086 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.77■□□□□ 0.59
GRIK1P39086 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
GRIK1P39086 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
GRIK1P39086 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
GRIK1P39086 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.77■□□□□ 0.59
GRIK1P39086 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GRIK1P39086 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.76■□□□□ 0.59
GRIK1P39086 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GRIK1P39086 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
GRIK1P39086 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
GRIK1P39086 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
GRIK1P39086 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GRIK1P39086 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GRIK1P39086 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
GRIK1P39086 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.76■□□□□ 0.59
GRIK1P39086 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
GRIK1P39086 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.76■□□□□ 0.59
GRIK1P39086 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GRIK1P39086 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GRIK1P39086 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GRIK1P39086 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GRIK1P39086 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.76■□□□□ 0.59
GRIK1P39086 FDX1P1-201ENST00000449115 551 ntBASIC18.76■□□□□ 0.59
GRIK1P39086 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GRIK1P39086 AP002469.2-201ENST00000531724 424 ntBASIC18.76■□□□□ 0.59
GRIK1P39086 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.76■□□□□ 0.59
GRIK1P39086 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.76■□□□□ 0.59
GRIK1P39086 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.76■□□□□ 0.59
GRIK1P39086 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.76■□□□□ 0.59
GRIK1P39086 MTDHP3-201ENST00000594186 672 ntBASIC18.76■□□□□ 0.59
GRIK1P39086 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
GRIK1P39086 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.76■□□□□ 0.59
GRIK1P39086 AP001269.4-201ENST00000609611 512 ntBASIC18.76■□□□□ 0.59
GRIK1P39086 AC116407.2-201ENST00000613639 860 ntBASIC18.76■□□□□ 0.59
GRIK1P39086 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.76■□□□□ 0.59
GRIK1P39086 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GRIK1P39086 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.76■□□□□ 0.59
GRIK1P39086 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
GRIK1P39086 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GRIK1P39086 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.76■□□□□ 0.59
GRIK1P39086 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GRIK1P39086 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
GRIK1P39086 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
GRIK1P39086 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.76■□□□□ 0.59
GRIK1P39086 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GRIK1P39086 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
GRIK1P39086 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GRIK1P39086 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GRIK1P39086 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GRIK1P39086 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GRIK1P39086 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
GRIK1P39086 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.75■□□□□ 0.59
GRIK1P39086 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
GRIK1P39086 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GRIK1P39086 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GRIK1P39086 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.75■□□□□ 0.59
GRIK1P39086 ABCD1P5-201ENST00000445663 754 ntBASIC18.75■□□□□ 0.59
GRIK1P39086 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.75■□□□□ 0.59
GRIK1P39086 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
GRIK1P39086 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.75■□□□□ 0.59
GRIK1P39086 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.75■□□□□ 0.59
GRIK1P39086 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GRIK1P39086 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GRIK1P39086 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GRIK1P39086 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GRIK1P39086 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GRIK1P39086 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
GRIK1P39086 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.75■□□□□ 0.59
GRIK1P39086 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
GRIK1P39086 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
GRIK1P39086 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.74■□□□□ 0.59
GRIK1P39086 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.74■□□□□ 0.59
GRIK1P39086 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GRIK1P39086 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GRIK1P39086 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
GRIK1P39086 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GRIK1P39086 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
GRIK1P39086 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.74■□□□□ 0.59
GRIK1P39086 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.74■□□□□ 0.59
GRIK1P39086 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GRIK1P39086 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GRIK1P39086 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GRIK1P39086 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
GRIK1P39086 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.74■□□□□ 0.59
GRIK1P39086 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GRIK1P39086 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GRIK1P39086 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.74■□□□□ 0.59
GRIK1P39086 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GRIK1P39086 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
GRIK1P39086 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.74■□□□□ 0.59
GRIK1P39086 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GRIK1P39086 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
GRIK1P39086 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.74■□□□□ 0.59
GRIK1P39086 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.74■□□□□ 0.59
GRIK1P39086 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
GRIK1P39086 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms