Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 STOM-202ENST00000347359 870 ntTSL 2 BASIC22.26■■□□□ 1.15
RFC4P35249 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RFC4P35249 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RFC4P35249 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
RFC4P35249 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RFC4P35249 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
RFC4P35249 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC22.26■■□□□ 1.15
RFC4P35249 GGTLC5P-201ENST00000617623 998 ntBASIC22.26■■□□□ 1.15
RFC4P35249 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
RFC4P35249 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
RFC4P35249 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC22.26■■□□□ 1.15
RFC4P35249 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
RFC4P35249 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
RFC4P35249 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
RFC4P35249 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RFC4P35249 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
RFC4P35249 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
RFC4P35249 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RFC4P35249 AC018445.3-201ENST00000624177 1945 ntBASIC22.25■■□□□ 1.15
RFC4P35249 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RFC4P35249 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RFC4P35249 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
RFC4P35249 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
RFC4P35249 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RFC4P35249 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC22.25■■□□□ 1.15
RFC4P35249 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
RFC4P35249 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RFC4P35249 NEK7-201ENST00000367383 586 ntTSL 2 BASIC22.25■■□□□ 1.15
RFC4P35249 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
RFC4P35249 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC22.25■■□□□ 1.15
RFC4P35249 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RFC4P35249 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC22.25■■□□□ 1.15
RFC4P35249 COX20P2-201ENST00000452636 358 ntBASIC22.25■■□□□ 1.15
RFC4P35249 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RFC4P35249 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC22.25■■□□□ 1.15
RFC4P35249 OR7E47P-204ENST00000575924 449 ntBASIC22.25■■□□□ 1.15
RFC4P35249 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RFC4P35249 TK1-204ENST00000590430 683 ntTSL 3 BASIC22.25■■□□□ 1.15
RFC4P35249 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC22.25■■□□□ 1.15
RFC4P35249 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RFC4P35249 AC004835.2-201ENST00000603762 682 ntBASIC22.25■■□□□ 1.15
RFC4P35249 AL096865.1-201ENST00000606796 927 ntBASIC22.25■■□□□ 1.15
RFC4P35249 AC093512.1-201ENST00000617969 520 ntBASIC22.25■■□□□ 1.15
RFC4P35249 AC091812.2-201ENST00000619081 385 ntBASIC22.25■■□□□ 1.15
RFC4P35249 AC007064.4-201ENST00000637740 555 ntBASIC22.25■■□□□ 1.15
RFC4P35249 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC22.25■■□□□ 1.15
RFC4P35249 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
RFC4P35249 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RFC4P35249 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RFC4P35249 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
RFC4P35249 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC22.24■■□□□ 1.15
RFC4P35249 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
RFC4P35249 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RFC4P35249 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC22.24■■□□□ 1.15
RFC4P35249 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RFC4P35249 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
RFC4P35249 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC22.24■■□□□ 1.15
RFC4P35249 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RFC4P35249 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RFC4P35249 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
RFC4P35249 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC22.24■■□□□ 1.15
RFC4P35249 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RFC4P35249 AP002414.1-201ENST00000391405 1147 ntBASIC22.24■■□□□ 1.15
RFC4P35249 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC22.24■■□□□ 1.15
RFC4P35249 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC22.24■■□□□ 1.15
RFC4P35249 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC22.24■■□□□ 1.15
RFC4P35249 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC22.24■■□□□ 1.15
RFC4P35249 AC109462.3-201ENST00000573934 613 ntBASIC22.24■■□□□ 1.15
RFC4P35249 AC023141.13-201ENST00000604991 943 ntBASIC22.24■■□□□ 1.15
RFC4P35249 AC019129.2-201ENST00000609837 1235 ntBASIC22.24■■□□□ 1.15
RFC4P35249 CITED2-204ENST00000618718 901 ntTSL 2 BASIC22.24■■□□□ 1.15
RFC4P35249 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RFC4P35249 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
RFC4P35249 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
RFC4P35249 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RFC4P35249 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RFC4P35249 AC097637.2-201ENST00000624096 1997 ntBASIC22.23■■□□□ 1.15
RFC4P35249 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RFC4P35249 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RFC4P35249 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC22.23■■□□□ 1.15
RFC4P35249 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
RFC4P35249 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RFC4P35249 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
RFC4P35249 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RFC4P35249 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RFC4P35249 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RFC4P35249 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RFC4P35249 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC22.23■■□□□ 1.15
RFC4P35249 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC22.23■■□□□ 1.15
RFC4P35249 BCRP1-201ENST00000444246 691 ntBASIC22.23■■□□□ 1.15
RFC4P35249 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC22.23■■□□□ 1.15
RFC4P35249 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC22.23■■□□□ 1.15
RFC4P35249 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC22.23■■□□□ 1.15
RFC4P35249 TMED1-207ENST00000591695 809 ntTSL 5 BASIC22.23■■□□□ 1.15
RFC4P35249 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC22.23■■□□□ 1.15
RFC4P35249 AC239800.4-201ENST00000603712 296 ntBASIC22.23■■□□□ 1.15
RFC4P35249 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RFC4P35249 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RFC4P35249 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RFC4P35249 GOLGA6L17P-202ENST00000614358 1398 ntBASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms