Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC13.15□□□□□ -0.3
CKS2P33552 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.15□□□□□ -0.3
CKS2P33552 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CKS2P33552 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CKS2P33552 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC13.15□□□□□ -0.31
CKS2P33552 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC13.15□□□□□ -0.31
CKS2P33552 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
CKS2P33552 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
CKS2P33552 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
CKS2P33552 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
CKS2P33552 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC13.14□□□□□ -0.31
CKS2P33552 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC13.14□□□□□ -0.31
CKS2P33552 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC13.14□□□□□ -0.31
CKS2P33552 AC106886.4-201ENST00000623557 2502 ntBASIC13.14□□□□□ -0.31
CKS2P33552 AC067930.6-201ENST00000623257 4947 ntBASIC13.14□□□□□ -0.31
CKS2P33552 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CKS2P33552 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
CKS2P33552 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CKS2P33552 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CKS2P33552 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CKS2P33552 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CKS2P33552 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CKS2P33552 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CKS2P33552 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CKS2P33552 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC13.14□□□□□ -0.31
CKS2P33552 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CKS2P33552 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC13.14□□□□□ -0.31
CKS2P33552 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CKS2P33552 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CKS2P33552 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CKS2P33552 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CKS2P33552 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC13.14□□□□□ -0.31
CKS2P33552 MIPEPP3-201ENST00000412105 444 ntBASIC13.14□□□□□ -0.31
CKS2P33552 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CKS2P33552 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CKS2P33552 SLC29A4P2-201ENST00000504749 1089 ntBASIC13.14□□□□□ -0.31
CKS2P33552 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC13.14□□□□□ -0.31
CKS2P33552 AC092118.2-201ENST00000613495 667 ntBASIC13.14□□□□□ -0.31
CKS2P33552 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CKS2P33552 AC099343.3-201ENST00000605834 2503 ntBASIC13.14□□□□□ -0.31
CKS2P33552 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.14□□□□□ -0.31
CKS2P33552 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CKS2P33552 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CKS2P33552 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC13.14□□□□□ -0.31
CKS2P33552 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC13.14□□□□□ -0.31
CKS2P33552 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CKS2P33552 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC13.14□□□□□ -0.31
CKS2P33552 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CKS2P33552 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CKS2P33552 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CKS2P33552 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
CKS2P33552 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CKS2P33552 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CKS2P33552 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CKS2P33552 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CKS2P33552 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CKS2P33552 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC13.13□□□□□ -0.31
CKS2P33552 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CKS2P33552 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CKS2P33552 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC13.13□□□□□ -0.31
CKS2P33552 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CKS2P33552 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CKS2P33552 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CKS2P33552 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CKS2P33552 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CKS2P33552 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CKS2P33552 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CKS2P33552 AC011270.2-201ENST00000624293 2550 ntBASIC13.13□□□□□ -0.31
CKS2P33552 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC13.13□□□□□ -0.31
CKS2P33552 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CKS2P33552 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CKS2P33552 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CKS2P33552 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CKS2P33552 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CKS2P33552 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CKS2P33552 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CKS2P33552 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CKS2P33552 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CKS2P33552 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CKS2P33552 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CKS2P33552 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC13.13□□□□□ -0.31
CKS2P33552 F2R-202ENST00000505600 442 ntTSL 2 BASIC13.13□□□□□ -0.31
CKS2P33552 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC13.13□□□□□ -0.31
CKS2P33552 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC13.13□□□□□ -0.31
CKS2P33552 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC13.13□□□□□ -0.31
CKS2P33552 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CKS2P33552 SOX15-203ENST00000570788 1093 ntBASIC13.13□□□□□ -0.31
CKS2P33552 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC13.13□□□□□ -0.31
CKS2P33552 AC060766.5-201ENST00000590539 871 ntBASIC13.13□□□□□ -0.31
CKS2P33552 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC13.13□□□□□ -0.31
CKS2P33552 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC13.13□□□□□ -0.31
CKS2P33552 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CKS2P33552 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CKS2P33552 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CKS2P33552 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC13.13□□□□□ -0.31
CKS2P33552 AC105020.1-201ENST00000435356 2205 ntBASIC13.13□□□□□ -0.31
CKS2P33552 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CKS2P33552 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CKS2P33552 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CKS2P33552 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms